RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MIXL1Q9H2W2 232 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 MED9Q9NWA0 146 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CKLFQ9UBR5 152 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CYSLTR1Q9Y271 337 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 ARL2BPQ9Y2Y0 163 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CCDC144AA2RUR9 1427 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 ADGRL3Q9HAR2 1447 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 BICRAQ9NZM4 1560 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CECR2Q9BXF3 1484 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 hCG_1818297A0A087WSY0 165 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 A8MT66 165 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 PIRO00625 290 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 OR7C1O76099 320 aaPredicted RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 PMP2P02689 132 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 SHBGP04278 402 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 CTSDP07339 412 aaPredicted RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 RBP1P09455 135 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 CYBAP13498 195 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 CTAG1AP78358 180 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 RIC1Q4ADV7 1423 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 LCN15Q6UWW0 184 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 OOSP2Q86WS3 158 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 KRT222Q8N1A0 295 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 Q8N2B8 174 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 GDPD1Q8N9F7 314 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 WFDC11Q8NEX6 87 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 OR52R1Q8NGF1 315 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 OR52L1Q8NGH7 329 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 OR10X1Q8NGY0 326 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 SLC25A40Q8TBP6 338 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 BTF3L4Q96K17 158 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 CEP19Q96LK0 163 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 C2orf50Q96LR7 162 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 GINS4Q9BRT9 223 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 C9orf16Q9BUW7 83 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 KIFC1Q9BW19 673 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 CCDC94Q9BW85 323 aaPredicted RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 HELZ2Q9BYK8 2649 aaKnown RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 NMNAT1Q9HAN9 279 aaPredicted RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 ENY2Q9NPA8 101 aa0.85□□□□□ -2.27
CD47-203ENST00000398258 FAM32AQ9Y421 112 aaKnown RBP0.85□□□□□ -2.27
CD47-203ENST00000398258 RB1CC1Q8TDY2 1594 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 SETD5Q9C0A6 1442 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 C1orf196B1AJZ1 125 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 CLDN25C9JDP6 229 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 CRPP02741 224 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 SERPINE1P05121 402 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 ARL14EPLP0DKL9 152 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 CRYGAP11844 174 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 RNASE3P12724 160 aaKnown RBP0.84□□□□□ -2.27
CD47-203ENST00000398258 SERPINB9P50453 376 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 ZNF846Q147U1 533 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 TMED2Q15363 201 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 LIN52Q52LA3 116 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 HACD4Q5VWC8 232 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 DPPA3Q6W0C5 159 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 Q6ZQT0 140 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 Q6ZSA8 131 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 OR4D11Q8NGI4 311 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 OR5A1Q8NGJ0 315 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 PARVBQ9HBI1 364 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 SLC39A9Q9NUM3 307 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 OPTCQ9UBM4 332 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 ERGIC3Q9Y282 383 aa0.84□□□□□ -2.27
CD47-203ENST00000398258 COL4A5P29400 1685 aa0.84□□□□□ -2.28
CD47-203ENST00000398258 TTC21AQ8NDW8 1320 aa0.84□□□□□ -2.28
CD47-203ENST00000398258 HECW1Q76N89 1606 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 A0A0D9SG52 128 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 IGKV2-29A2NJV5 120 aaPredicted RBP0.83□□□□□ -2.28
CD47-203ENST00000398258 FAM159BA6NKW6 160 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 TCL1BO95988 128 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 C8GP07360 202 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 CST2P09228 141 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 MIFP14174 115 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 CASP1P29466 404 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 PPP1R2P41236 205 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 LINC01554Q52M75 96 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 C10orf55Q5SWW7 151 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 TEX36Q5VZQ5 186 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 PPP1R2P3Q6NXS1 205 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 AAED1Q7RTV5 226 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 RPS19BP1Q86WX3 136 aaKnown RBP0.83□□□□□ -2.28
CD47-203ENST00000398258 SIGLECL1Q8N7X8 197 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 ADAT1Q9BUB4 502 aaKnown RBP0.83□□□□□ -2.28
CD47-203ENST00000398258 TMEM133Q9H2Q1 129 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 OSTCQ9NRP0 149 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 SOX21Q9Y651 276 aaPredicted RBP0.83□□□□□ -2.28
CD47-203ENST00000398258 PCF11O94913 1555 aaKnown RBP0.83□□□□□ -2.28
CD47-203ENST00000398258 RTL1A6NKG5 1358 aa0.83□□□□□ -2.28
CD47-203ENST00000398258 FREM1Q5H8C1 2179 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 BAZ2BQ9UIF8 2168 aaKnown RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 FUOMA2VDF0 154 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 TMEM212A6NML5 194 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 OR2T1O43869 369 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 ANGP03950 147 aaKnown RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 SPI1P17947 270 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 PPIBP23284 216 aaKnown RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 S100A4P26447 101 aaKnown RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 ERP29P30040 261 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms