RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 CA7P43166 264 aa9.42□□□□□ -0.9
TTC28-201ENST00000397906 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
TTC28-201ENST00000397906 FOLR2P14207 255 aa9.42□□□□□ -0.9
TTC28-201ENST00000397906 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
TTC28-201ENST00000397906 ASCL4Q6XD76 172 aa9.42□□□□□ -0.9
TTC28-201ENST00000397906 COL8A2P25067 703 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 OR10S1Q8NGN2 331 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
TTC28-201ENST00000397906 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 ZNF319Q9P2F9 582 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 PYYP10082 97 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 TMEM178BH3BS89 294 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 FABP2P12104 132 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 C12orf54Q6X4T0 127 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 LDLRAD4O15165 306 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 OR9G9P0C7N8 305 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 CDX1P47902 265 aaPredicted RBP9.41□□□□□ -0.9
TTC28-201ENST00000397906 APOHP02749 345 aaPredicted RBP9.41□□□□□ -0.9
TTC28-201ENST00000397906 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
TTC28-201ENST00000397906 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 IFT22Q9H7X7 185 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 IGHV1-8P0DP01 117 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 SNAI2O43623 268 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 SHISA3A0PJX4 238 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 H3BRM9 83 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 C10orf55Q5SWW7 151 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 CHCHD5Q9BSY4 110 aa9.41□□□□□ -0.9
TTC28-201ENST00000397906 CSRP3P50461 194 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 MGAMO43451 1857 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 TRBV6-7A0A0A0MS04 114 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 CNTFRP26992 372 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 EFNA2O43921 213 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 SOD3P08294 240 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 NMBP08949 121 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 IGKV1-9A0A0C4DH69 117 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 PRR32B1ATL7 298 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 LILRA1O75019 489 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 IGLV3-32A0A0A0MS00 114 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 IL18BPO95998 194 aa9.4□□□□□ -0.9
TTC28-201ENST00000397906 ATP5IP56385 69 aaPredicted RBP9.4□□□□□ -0.91
TTC28-201ENST00000397906 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.91
TTC28-201ENST00000397906 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 EVI2AP22794 236 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 PKIAP61925 76 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 EFNB1P98172 346 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 ESPL1Q14674 2120 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 IGHV1-3A0A0C4DH29 117 aa9.4□□□□□ -0.91
TTC28-201ENST00000397906 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 SLC25A15Q9Y619 301 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 CD177Q8N6Q3 437 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 KLF17Q5JT82 389 aaPredicted RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 RNASE7Q9H1E1 156 aaKnown RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 J3QKU1 62 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 UCP1P25874 307 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
TTC28-201ENST00000397906 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 LINC00862A6NCI5 91 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
TTC28-201ENST00000397906 K7ENP7 123 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 PUSL1Q8N0Z8 303 aaKnown RBP9.38□□□□□ -0.91
TTC28-201ENST00000397906 MDS2Q8NDY4 140 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 TMEM50AO95807 157 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 CIARTQ8N365 385 aaPredicted RBP9.38□□□□□ -0.91
TTC28-201ENST00000397906 RTTNQ86VV8 2226 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
TTC28-201ENST00000397906 IL17RELQ6ZVW7 336 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 AHCTF1Q8WYP5 2266 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 NAT1P18440 290 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 TPTE2P1Q5T6R2 138 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 DTX2Q86UW9 622 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 RPRMLQ8N4K4 120 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 FAM131CQ96AQ9 280 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
TTC28-201ENST00000397906 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 ZNF688P0C7X2 276 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
TTC28-201ENST00000397906 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
TTC28-201ENST00000397906 HOXA5P20719 270 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms