RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 STOML3Q8TAV4 291 aa13.22□□□□□ -0.29
TSPAN4-205ENST00000397406 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-205ENST00000397406 ARV1Q9H2C2 271 aa13.22□□□□□ -0.29
TSPAN4-205ENST00000397406 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
TSPAN4-205ENST00000397406 BORCS7-ASMTA0A0B4J1R7 106 aa13.21□□□□□ -0.3
TSPAN4-205ENST00000397406 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.3
TSPAN4-205ENST00000397406 IGLV1-40P01703 118 aa13.21□□□□□ -0.3
TSPAN4-205ENST00000397406 C3orf56Q8N813 242 aa13.21□□□□□ -0.3
TSPAN4-205ENST00000397406 MRPL36Q9P0J6 103 aaKnown RBP13.21□□□□□ -0.3
TSPAN4-205ENST00000397406 TRRAPQ9Y4A5 3859 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 IGHV3-21A0A0B4J1V1 117 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 RPS10-NUDT3A0A1W2PQS6 291 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 H3BUA1 57 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 OR2J3O76001 311 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 NDUFB8O95169 186 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 CRYBA1P05813 215 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 DEFA5Q01523 94 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 ETFRF1Q6IPR1 90 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 ST8SIA2Q92186 375 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 GON7Q9BXV9 100 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 THYN1Q9P016 225 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 WDR83OSQ9Y284 106 aa13.2□□□□□ -0.3
TSPAN4-205ENST00000397406 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 IFNA5P01569 189 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 IGHG4P01861 327 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 RHOGP84095 191 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 BAP18Q8IXM2 172 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 SCARB1Q8WTV0 552 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 SLC35E1Q96K37 410 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 GINS3Q9BRX5 216 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 ZNF747Q9BV97 191 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 C16orf95Q9H693 158 aa13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 LSM4Q9Y4Z0 139 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-205ENST00000397406 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 TPT1P13693 172 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 IFITM2Q01629 132 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 TMEM144Q7Z5S9 345 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 ZNF329Q86UD4 541 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
TSPAN4-205ENST00000397406 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 CFDP00746 253 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 FGF7P21781 194 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 RND2P52198 227 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 EIF5AP63241 154 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 RUNX1Q01196 453 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 HSD17B11Q8NBQ5 300 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
TSPAN4-205ENST00000397406 PSMB11A5LHX3 300 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 NDUFA7O95182 113 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 TRGV3P03979 118 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 PF4V1P10720 104 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 PSMB8P28062 276 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 FOXL1Q12952 345 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 C15orf32Q32M92 178 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 TEPPQ6URK8 271 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 THAP8Q8NA92 274 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 RFNGQ9Y644 331 aa13.16□□□□□ -0.3
TSPAN4-205ENST00000397406 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 MPDU1O75352 247 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 TPPP2P59282 170 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 SLC35B1P78383 322 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 ACSM6Q6P461 480 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 MGST2Q99735 147 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 RSG1Q9BU20 258 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 S4R3C0 116 aa13.15□□□□□ -0.3
TSPAN4-205ENST00000397406 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 SPP1P10451 314 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 RAB9AP51151 201 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 MFAP4P55083 255 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 FOXE3Q13461 319 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 TEX38Q6PEX7 206 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 CENPVQ7Z7K6 275 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 LINC01006Q8NI28 216 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 PHYHIPLQ96FC7 376 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms