RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DHRS11Q6UWP2 260 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 ZNF705AQ6ZN79 300 aaPredicted RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 ZNF2Q9BSG1 426 aaPredicted RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 FAM212BQ9NTI7 297 aaPredicted RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 EHFQ9NZC4 300 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 RRP15Q9Y3B9 282 aaKnown RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
SEC13-206ENST00000397102 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
SEC13-206ENST00000397102 GPR31O00270 319 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
SEC13-206ENST00000397102 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
SEC13-206ENST00000397102 PPP5CP53041 499 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 EMP1P54849 157 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 SCAND1P57086 179 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 HSPE1P61604 102 aaKnown RBP10.63□□□□□ -0.71
SEC13-206ENST00000397102 H2BFWTQ7Z2G1 175 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 SLC25A38Q96DW6 304 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 SEC22AQ96IW7 307 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 AUNIPQ9H7T9 357 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
SEC13-206ENST00000397102 H3BMM0 161 aa10.62□□□□□ -0.71
SEC13-206ENST00000397102 CORTO00230 105 aa10.62□□□□□ -0.71
SEC13-206ENST00000397102 OXA1LQ15070 435 aa10.62□□□□□ -0.71
SEC13-206ENST00000397102 OR5H6Q8NGV6 325 aa10.62□□□□□ -0.71
SEC13-206ENST00000397102 FXYD6Q9H0Q3 95 aa10.62□□□□□ -0.71
SEC13-206ENST00000397102 TXNL4BQ9NX01 149 aaKnown RBP10.62□□□□□ -0.71
SEC13-206ENST00000397102 MEIS3P1A6NDR6 274 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 CLN5O75503 358 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 SCGB2A1O75556 95 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 SNCAP37840 140 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 AP2S1P53680 142 aaPredicted RBP10.61□□□□□ -0.71
SEC13-206ENST00000397102 AQP4P55087 323 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
SEC13-206ENST00000397102 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 TMEM230Q96A57 120 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 SEPSECSQ9HD40 501 aaKnown RBP10.61□□□□□ -0.71
SEC13-206ENST00000397102 IFT46Q9NQC8 304 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 TMED3Q9Y3Q3 217 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 RFNGQ9Y644 331 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 U3KQE9 123 aa10.61□□□□□ -0.71
SEC13-206ENST00000397102 DNAH5Q8TE73 4624 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 FAM90A26D6RGX4 464 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 INS-IGF2F8WCM5 200 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 HTN3P15516 51 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 RFX2P48378 723 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 TMEM88Q6PEY1 159 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 GLMPQ8WWB7 406 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
SEC13-206ENST00000397102 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
SEC13-206ENST00000397102 EBAG9O00559 213 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 PHLDA2Q53GA4 152 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 SPINK9Q5DT21 86 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 MRGPRFQ96AM1 343 aa10.59□□□□□ -0.71
SEC13-206ENST00000397102 YTHDF1Q9BYJ9 559 aaKnown RBP10.59□□□□□ -0.71
SEC13-206ENST00000397102 IGHV3OR16-12A0A075B7B8 117 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 NBDYA0A0U1RRE5 68 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 IGKV1-17P01599 117 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 PMP2P02689 132 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 RNASE2P10153 161 aaKnown RBP10.58□□□□□ -0.72
SEC13-206ENST00000397102 S100GP29377 79 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
SEC13-206ENST00000397102 TAS2R46P59540 309 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 OR5H2Q8NGV7 314 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 ATG101Q9BSB4 218 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
SEC13-206ENST00000397102 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 BLOC1S6Q9UL45 172 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 ANAPC10Q9UM13 185 aa10.58□□□□□ -0.72
SEC13-206ENST00000397102 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 HNRNPCP07910 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
SEC13-206ENST00000397102 SDC2P34741 201 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 OPRK1P41145 380 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 TIGITQ495A1 244 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 IDNKQ5T6J7 187 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 TBC1D26Q86UD7 250 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 OR6F1Q8NGZ6 308 aa10.57□□□□□ -0.72
SEC13-206ENST00000397102 NAT1P18440 290 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 NKX2-1P43699 371 aaPredicted RBP10.56□□□□□ -0.72
SEC13-206ENST00000397102 RPL5P46777 297 aaKnown RBP10.56□□□□□ -0.72
SEC13-206ENST00000397102 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
SEC13-206ENST00000397102 MXD1Q05195 221 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 MLANAQ16655 118 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 LPCAT3Q6P1A2 487 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 SPATA12Q7Z6I5 190 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 SSR3Q9UNL2 185 aa10.56□□□□□ -0.72
SEC13-206ENST00000397102 CLEC2LP0C7M8 214 aa10.55□□□□□ -0.72
SEC13-206ENST00000397102 FXYD7P58549 80 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms