RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 CYB5R2Q6BCY4 276 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 Q6P435 159 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 TRBV20OR9-2A0A075B6H5 130 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 CDX1P47902 265 aaPredicted RBP11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 SDF2L1Q9HCN8 221 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 H0YIZ8 118 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 NDUFS8O00217 210 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 FHL1Q13642 323 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 MBD3L1Q8WWY6 194 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
PPARGC1B-203ENST00000394320 TRAV40A0A0B4J280 105 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 ZNF98A6NK75 572 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 CD5P06127 495 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 ADIPOQQ15848 244 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 NEU1Q99519 415 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 DCAF16Q9NXF7 216 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 NMUP48645 174 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 DPRXA6NFQ7 191 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 EGR1P18146 543 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 C12orf54Q6X4T0 127 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 GAFA1Q96PS6 74 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 TUBA4BQ9H853 241 aa11.92□□□□□ -0.5
PPARGC1B-203ENST00000394320 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 FABP5P3A8MUU1 101 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 C1QTNF9BB2RNN3 333 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 S4R3C0 116 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 FGF16O43320 207 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 LEPP41159 167 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 ATP5G3P48201 142 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 IGHV3-49A0A0A0MS15 119 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 NPFFO15130 113 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
PPARGC1B-203ENST00000394320 COX6CP09669 75 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 SRSF6Q13247 344 aaKnown RBP11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 CIRBPQ14011 172 aaKnown RBP11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 NMSQ5H8A3 153 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 C8orf46Q8TAG6 207 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 UQCR10Q9UDW1 63 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 RNF224P0DH78 156 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 ROS1P08922 2347 aa11.9□□□□□ -0.5
PPARGC1B-203ENST00000394320 MLNRO43193 412 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 TFF1P04155 84 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 TMEM136Q6ZRR5 245 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 DMRTA2Q96SC8 542 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 OSTCQ9NRP0 149 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.51
PPARGC1B-203ENST00000394320 ANAPC1Q9H1A4 1944 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 ATP5LO75964 103 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 SELLP14151 372 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 COL5A1-AS1Q5SY13 56 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 FRMPD3Q5JV73 1810 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 PAX8Q06710 450 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 CACNA1BQ00975 2339 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 MYO7BQ6PIF6 2116 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 OVOL1O14753 267 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 RPLP1P05386 114 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 GATA4P43694 442 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 EFNB3Q15768 340 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 COQ2Q96H96 371 aa11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-203ENST00000394320 IGKV3-20P01619 116 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 GATA3P23771 443 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 IGKV1D-17A0A075B6S4 117 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 LGALS3P17931 250 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 KIAA1644Q3SXP7 199 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 DOCK8Q8NF50 2099 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 HGFACQ04756 655 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 SLC25A34Q6PIV7 304 aa11.88□□□□□ -0.51
PPARGC1B-203ENST00000394320 Q8TCH9 128 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms