RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 P2RY1P47900 373 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 TAS2R20P59543 309 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 HSPE1P61604 102 aaKnown RBP11.05□□□□□ -0.64
CHMP3-202ENST00000393773 KRTAP4-5Q9BYR2 181 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 RAB26Q9ULW5 256 aa11.05□□□□□ -0.64
CHMP3-202ENST00000393773 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 CRYBB3P26998 211 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 PPP5CP53041 499 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 ERHP84090 104 aaKnown RBP11.04□□□□□ -0.64
CHMP3-202ENST00000393773 IZUMO4Q1ZYL8 232 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
CHMP3-202ENST00000393773 A0A1W2PS18 150 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 M0R2N4 97 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 TMEM127O75204 238 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 P0C879 139 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 NPPCP23582 126 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 TMEM69Q5SWH9 247 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 METTL26Q96S19 204 aa11.03□□□□□ -0.64
CHMP3-202ENST00000393773 FNDC4Q9H6D8 234 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-202ENST00000393773 CLN5O75503 358 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 IGKV1-5P01602 117 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 CD74P04233 296 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 RNASE2P10153 161 aaKnown RBP11.02□□□□□ -0.65
CHMP3-202ENST00000393773 HLA-DMAP28067 261 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 TGFBR1P36897 503 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 KCTD21Q4G0X4 260 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 CENPSQ8N2Z9 138 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 SLC35G3Q8N808 338 aa11.02□□□□□ -0.65
CHMP3-202ENST00000393773 S100A16Q96FQ6 103 aaKnown RBP11.02□□□□□ -0.65
CHMP3-202ENST00000393773 CORTO00230 105 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 SNCAP37840 140 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 LPCAT3Q6P1A2 487 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 Q6ZR54 194 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 U3KQE9 123 aa11.01□□□□□ -0.65
CHMP3-202ENST00000393773 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
CHMP3-202ENST00000393773 A0A0B4J293 547 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 S100GP29377 79 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 PRSS3P35030 304 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 UCP3P55916 312 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 BSXQ3C1V8 233 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 PSMG4Q5JS54 123 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 SAMD12Q8N8I0 201 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 OR4X1Q8NH49 305 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 GPX8Q8TED1 209 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 GLMPQ8WWB7 406 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 RAB40CQ96S21 281 aa11□□□□□ -0.65
CHMP3-202ENST00000393773 HELTA6NFD8 242 aa10.99□□□□□ -0.65
CHMP3-202ENST00000393773 OPRK1P41145 380 aa10.99□□□□□ -0.65
CHMP3-202ENST00000393773 DHRS2Q13268 280 aa10.99□□□□□ -0.65
CHMP3-202ENST00000393773 TIGITQ495A1 244 aa10.99□□□□□ -0.65
CHMP3-202ENST00000393773 HOXA1P49639 335 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-202ENST00000393773 RND3P61587 244 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 TSPAN5P62079 268 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 MLANAQ16655 118 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-202ENST00000393773 Q6ZRM9 215 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 CROCCP3Q8IVE0 287 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 NARS2Q96I59 477 aaKnown RBP10.98□□□□□ -0.65
CHMP3-202ENST00000393773 TP53RKQ96S44 253 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 XCL2Q9UBD3 114 aa10.98□□□□□ -0.65
CHMP3-202ENST00000393773 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 ZNF705FA8MVS1 300 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 ZNF705DP0CH99 300 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 ZNF705BP0CI00 300 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 RPL5P46777 297 aaKnown RBP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 AKR1C2P52895 323 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 SUB1P53999 127 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 NEDD8Q15843 81 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 TMEM230Q96A57 120 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 NEU1Q99519 415 aa10.97□□□□□ -0.65
CHMP3-202ENST00000393773 YTHDF1Q9BYJ9 559 aaKnown RBP10.97□□□□□ -0.65
CHMP3-202ENST00000393773 A0A0G2JRQ6 117 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 H3BMM0 161 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 SCGB2A1O75556 95 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 IFNA17P01571 189 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 HNRNPCP07910 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHMP3-202ENST00000393773 IGLC1P0CG04 106 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 NPY1RP25929 384 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 RCVRNP35243 200 aa10.96□□□□□ -0.65
CHMP3-202ENST00000393773 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.65
CHMP3-202ENST00000393773 EIF2B2P49770 351 aaKnown RBP10.96□□□□□ -0.65
CHMP3-202ENST00000393773 USF2Q15853 346 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-202ENST00000393773 HLA-DRB4P13762 266 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 PI3P19957 117 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 ETV6P41212 452 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
CHMP3-202ENST00000393773 LHFPL1Q86WI0 220 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms