RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CNBD2Q96M20 576 aa6.81□□□□□ -1.32
IFT88-203ENST00000389373 NEU1Q99519 415 aa6.81□□□□□ -1.32
IFT88-203ENST00000389373 PRNDQ9UKY0 176 aa6.81□□□□□ -1.32
IFT88-203ENST00000389373 RRP15Q9Y3B9 282 aaKnown RBP6.81□□□□□ -1.32
IFT88-203ENST00000389373 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 H3BMM0 161 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 RGS10O43665 173 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 RLN1P04808 185 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 RAB3BP20337 219 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 MYL9P24844 172 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 EIF2B2P49770 351 aaKnown RBP6.8□□□□□ -1.32
IFT88-203ENST00000389373 ERHP84090 104 aaKnown RBP6.8□□□□□ -1.32
IFT88-203ENST00000389373 Q5VSD8 79 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
IFT88-203ENST00000389373 BEST4Q8NFU0 473 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 FCAMRQ8WWV6 532 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 FRZBQ92765 325 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 MGLLQ99685 303 aa6.8□□□□□ -1.32
IFT88-203ENST00000389373 YTHDF2Q9Y5A9 579 aaKnown RBP6.8□□□□□ -1.32
IFT88-203ENST00000389373 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 ZNF705FA8MVS1 300 aaPredicted RBP6.79□□□□□ -1.32
IFT88-203ENST00000389373 J3QL48 77 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
IFT88-203ENST00000389373 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
IFT88-203ENST00000389373 F2RP25116 425 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 CRYBB3P26998 211 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 CCL18P55774 89 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 HERV-K104P61576 105 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 SNRPD3P62318 126 aaKnown RBP6.79□□□□□ -1.32
IFT88-203ENST00000389373 SPINK9Q5DT21 86 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 PRSS48Q7RTY5 328 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 OR4A16Q8NH70 328 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 C7orf50Q9BRJ6 194 aaKnown RBP6.79□□□□□ -1.32
IFT88-203ENST00000389373 ACOT13Q9NPJ3 140 aa6.79□□□□□ -1.32
IFT88-203ENST00000389373 PGLYRP1O75594 196 aaPredicted RBP6.78□□□□□ -1.32
IFT88-203ENST00000389373 HBE1P02100 147 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 GNRHRP30968 328 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
IFT88-203ENST00000389373 DEFB1P60022 68 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 OXA1LQ15070 435 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 KCTD21Q4G0X4 260 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 LGALS14Q8TCE9 139 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 MDFICQ9P1T7 246 aa6.78□□□□□ -1.32
IFT88-203ENST00000389373 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.32
IFT88-203ENST00000389373 TRAV1-2A0A0B4J238 106 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 FAM90A26D6RGX4 464 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 F5H768 121 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 SNCAP37840 140 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 AP2S1P53680 142 aaPredicted RBP6.77□□□□□ -1.33
IFT88-203ENST00000389373 GABARAPL2P60520 117 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 CLINT1Q14677 625 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 TBCEQ15813 527 aaPredicted RBP6.77□□□□□ -1.33
IFT88-203ENST00000389373 MLANAQ16655 118 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 RRN3P1Q2M238 152 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 GDF5OSQ5U4N7 250 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 H2BFWTQ7Z2G1 175 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 HOGA1Q86XE5 327 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 OR4B1Q8NGF8 309 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 GOLT1BQ9Y3E0 138 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 LINC00588Q9Y4M8 146 aa6.77□□□□□ -1.33
IFT88-203ENST00000389373 TRAV18A0A075B6X5 111 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 MEIS3P1A6NDR6 274 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
IFT88-203ENST00000389373 HNRNPCP07910 306 aaKnown RBP eCLIP6.76□□□□□ -1.33
IFT88-203ENST00000389373 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 XGP55808 180 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 PRCDQ00LT1 54 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 TIGITQ495A1 244 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 C16orf54Q6UWD8 224 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 ZNF114Q8NC26 417 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 FCGR1BQ92637 280 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 BORCS5Q969J3 196 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 MAGT1Q9H0U3 335 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 Q9H8V8 135 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 PTTG2Q9NZH5 202 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 MRPL36Q9P0J6 103 aaKnown RBP6.76□□□□□ -1.33
IFT88-203ENST00000389373 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
IFT88-203ENST00000389373 TRDV1A0A1B0GX56 115 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 CLN5O75503 358 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 SCGB2A1O75556 95 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 SCGNO76038 276 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 OPRK1P41145 380 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 HSPE1P61604 102 aaKnown RBP6.75□□□□□ -1.33
IFT88-203ENST00000389373 C22orf42Q6IC83 251 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 C1orf158Q8N1D5 194 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 OR5AP2Q8NGF4 316 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 GLMPQ8WWB7 406 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 ZNF2Q9BSG1 426 aaPredicted RBP6.75□□□□□ -1.33
IFT88-203ENST00000389373 TMEM208Q9BTX3 173 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 SLC35B3Q9H1N7 401 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 NDUFB11Q9NX14 153 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 EHFQ9NZC4 300 aa6.75□□□□□ -1.33
IFT88-203ENST00000389373 DAPK2Q9UIK4 370 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms