RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PILRBQ9UKJ0 227 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 H3BRM9 83 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 IGKV3-15P01624 115 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 IGLC1P0CG04 106 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 RNASE2P10153 161 aaKnown RBP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 CCL4P13236 92 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 ERHP84090 104 aaKnown RBP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 CACNA1EQ15878 2313 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 GDF5OSQ5U4N7 250 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 TMPRSS7Q7RTY8 843 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 ATOH7Q8N100 152 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 CD177Q8N6Q3 437 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 OR5A1Q8NGJ0 315 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 OR2T6Q8NHC8 308 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 OSR1Q8TAX0 266 aaPredicted RBP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 CT55Q8WUE5 264 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 MLST8Q9BVC4 326 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 ZNF430Q9H8G1 570 aaPredicted RBP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 ZNF355PQ9NSJ1 428 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 IGHV1-24A0A0C4DH33 117 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 HAX1O00165 279 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 TM4SF5O14894 197 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 WNT9BO14905 357 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 CER1O95813 267 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 MAGEA5P43359 124 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
PTPRR-203ENST00000378778 RPL8P62917 257 aaKnown RBP6.68□□□□□ -1.34
PTPRR-203ENST00000378778 SLC35B1P78383 322 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 C10orf113Q5VZT2 155 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 SSX8Q7RTT4 187 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 OR2Z1Q8NG97 314 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 RFESDQ8TAC1 157 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 CLCF1Q9UBD9 225 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 EPDR1Q9UM22 224 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 C19orf71A6NCJ1 209 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 CBY3A6NI87 242 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 SRRM4A7MD48 611 aaKnown RBP6.68□□□□□ -1.34
PTPRR-203ENST00000378778 DEFB108AA8MXU0 73 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 CORTO00230 105 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 TIMM8AO60220 97 aaPredicted RBP6.68□□□□□ -1.34
PTPRR-203ENST00000378778 HOXC12P31275 282 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 ZXDAP98168 799 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 PAX2Q02962 417 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 RPL39P5Q59GN2 51 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 SPINK14Q6IE38 97 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 ETFRF1Q6IPR1 90 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 LRRC29Q8WV35 223 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 PERPQ96FX8 193 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 URB1-AS1Q96HZ7 61 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 FAM234AQ9H0X4 552 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
PTPRR-203ENST00000378778 FREM1Q5H8C1 2179 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 LOC102724200A0A096LPH7 203 aaPredicted RBP6.67□□□□□ -1.34
PTPRR-203ENST00000378778 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 TCRBV4S1A1TA0A5B7 111 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 NPIPB6E9PJ23 425 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 PSG1P11464 419 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 PSG9Q00887 426 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 PMS2CLQ68D20 193 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 Q6AWC8 147 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 AMMECR1LQ6DCA0 310 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 UFSP1Q6NVU6 142 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 Q6ZT83 130 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 C5orf17Q8NAS9 161 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 FAM168AQ92567 244 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 NPFFR1Q9GZQ6 430 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 ZNF835Q9Y2P0 537 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 GON4LQ3T8J9 2241 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 IGKV1OR2-108A0A075B7D4 117 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 CSN1S1P47710 185 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 ALKBH6Q3KRA9 238 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 ZNF826PQ6ZT77 177 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 PDPNQ86YL7 162 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 OR4X2Q8NGF9 303 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 VSTM2AQ8TAG5 236 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 FAM222BQ8WU58 562 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 FXYD5Q96DB9 178 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 CDH23Q9H251 3354 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 PCSK5Q92824 1860 aa6.67□□□□□ -1.34
PTPRR-203ENST00000378778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.66□□□□□ -1.34
PTPRR-203ENST00000378778 MUC21A0A0G2JKD1 596 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 MUC21A0A140T8X8 626 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 GAGE10A6NGK3 116 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 LTAP01374 205 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 P01737 135 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 SAA2P0DJI9 122 aaPredicted RBP6.66□□□□□ -1.34
PTPRR-203ENST00000378778 IGHV1-2P23083 117 aa6.66□□□□□ -1.34
PTPRR-203ENST00000378778 C3orf36Q3SXR2 165 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms