RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 NXF2Q9GZY0 626 aaKnown RBP6.96□□□□□ -1.3
C9orf85-202ENST00000377027 IGKV3-7A0A075B6H7 116 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 A0A1B0GU03 582 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 B5MCH6 92 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 NUPL2O15504 423 aaKnown RBP6.95□□□□□ -1.3
C9orf85-202ENST00000377027 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 TFPI2P48307 235 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 TAS2R46P59540 309 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 NANOS2P60321 138 aaKnown RBP6.95□□□□□ -1.3
C9orf85-202ENST00000377027 PRCDQ00LT1 54 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 PVRIGQ6DKI7 326 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 LAMTOR1Q6IAA8 161 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 GBGT1Q8N5D6 347 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 TMEM116Q8NCL8 245 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 SLC25A46Q96AG3 418 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 S100A16Q96FQ6 103 aaKnown RBP6.95□□□□□ -1.3
C9orf85-202ENST00000377027 VSIRQ9H7M9 311 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 PRNDQ9UKY0 176 aa6.95□□□□□ -1.3
C9orf85-202ENST00000377027 IGHV3-66A0A0C4DH42 116 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 A0A0G2JRQ6 117 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 DEFB4AO15263 64 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 PRSS3P35030 304 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 NCS1P62166 190 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 TOMM20LQ6UXN7 152 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 OR6F1Q8NGZ6 308 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 TMEM56Q96MV1 263 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 CSTL1Q9H114 145 aa6.94□□□□□ -1.3
C9orf85-202ENST00000377027 C11orf68Q9H3H3 251 aaKnown RBP6.94□□□□□ -1.3
C9orf85-202ENST00000377027 FNDC4Q9H6D8 234 aaPredicted RBP6.94□□□□□ -1.3
C9orf85-202ENST00000377027 FAM212BQ9NTI7 297 aaPredicted RBP6.94□□□□□ -1.3
C9orf85-202ENST00000377027 A0A0B4J293 547 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 M0QYG6 137 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 SNAPC5O75971 98 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 ELK1P19419 428 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 MFAP4P55083 255 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 UCP3P55916 312 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 HSPE1P61604 102 aaKnown RBP6.93□□□□□ -1.3
C9orf85-202ENST00000377027 LEMD1Q68G75 181 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 TCF24Q7RTU0 167 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 CMTM1Q8IZ96 169 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 Q8NAQ8 132 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 PINX1Q96BK5 328 aaKnown RBP6.93□□□□□ -1.3
C9orf85-202ENST00000377027 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 MS4A6AQ9H2W1 248 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 Q9H521 79 aa6.93□□□□□ -1.3
C9orf85-202ENST00000377027 TRAV14DV4A0A0A6YYC5 116 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 CYB5BO43169 146 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 HPGDSO60760 199 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 DFFBO76075 338 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 YIF1AO95070 293 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 RNASE2P10153 161 aaKnown RBP6.92□□□□□ -1.3
C9orf85-202ENST00000377027 C4BPBP20851 252 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 RELQ04864 619 aaPredicted RBP6.92□□□□□ -1.3
C9orf85-202ENST00000377027 SNX29P2Q8IUI4 249 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 OR4D10Q8NGI6 311 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 OR11H2Q8NH07 326 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 GATAD1Q8WUU5 269 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 TSC22D3Q99576 134 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 TXN2Q99757 166 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 RARRES2Q99969 163 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 FKBP11Q9NYL4 201 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
C9orf85-202ENST00000377027 PUS1Q9Y606 427 aaKnown RBP eCLIP6.92□□□□□ -1.3
C9orf85-202ENST00000377027 MPTX1A8MV57 137 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 INS-IGF2F8WCM5 200 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 ST8SIA3O43173 380 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 TMEM50AO95807 157 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 CA1P00915 261 aaPredicted RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 APOA1P02647 267 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RBMY1A1P0DJD3 496 aaKnown RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RBMY1CP0DJD4 496 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RCVRNP35243 200 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 PPP5CP53041 499 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 DEFB131AP59861 70 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RND3P61587 244 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 VBP1P61758 197 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RBMY1FQ15415 496 aaKnown RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 BSXQ3C1V8 233 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 RNASE12Q5GAN4 147 aaKnown RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 H2BFWTQ7Z2G1 175 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 TSPAN14Q8NG11 270 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 OR4A16Q8NH70 328 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 NAA50Q9GZZ1 169 aaKnown RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 TMPRSS5Q9H3S3 457 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 KLK11Q9UBX7 282 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
C9orf85-202ENST00000377027 HSPG2P98160 4391 aa6.91□□□□□ -1.3
C9orf85-202ENST00000377027 K7EQG2 157 aa6.9□□□□□ -1.3
C9orf85-202ENST00000377027 GNG7O60262 68 aa6.9□□□□□ -1.3
C9orf85-202ENST00000377027 IGKV1-17P01599 117 aa6.9□□□□□ -1.3
C9orf85-202ENST00000377027 TSPAN5P62079 268 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms