RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SPATA45Q537H7 98 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 GPR82Q96P67 336 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 IMMP2LQ96T52 175 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
C9orf47-203ENST00000375851 TRBV6-6A0A0A6YYG2 114 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 M0R3E3 92 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 NUDT3O95989 172 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 LBHQ53QV2 105 aaPredicted RBP11.26□□□□□ -0.61
C9orf47-203ENST00000375851 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 COQ2Q96H96 371 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
C9orf47-203ENST00000375851 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 DCAF16Q9NXF7 216 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 EFNB3Q15768 340 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 FAM74A4Q5TZK3 123 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 ASCL4Q6XD76 172 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
C9orf47-203ENST00000375851 TCRBV4S1A1TA0A5B7 111 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
C9orf47-203ENST00000375851 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
C9orf47-203ENST00000375851 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
C9orf47-203ENST00000375851 TREML4Q6UXN2 200 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 C5orf52A6NGY3 159 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 E9PQ18 207 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 PYYP10082 97 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 ATRXP46100 2492 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
C9orf47-203ENST00000375851 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 IGHV2-26A0A0B4J1V2 119 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 HS3ST6Q96QI5 342 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 IGKV1D-17A0A075B6S4 117 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 RPP21Q9H633 154 aaKnown RBP11.24□□□□□ -0.61
C9orf47-203ENST00000375851 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 DDTP30046 118 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 GNG5P63218 68 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 Q6ZS49 121 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
C9orf47-203ENST00000375851 LINC00473A8K010 186 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 M0R381 172 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 RHOGP84095 191 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 CIARTQ8N365 385 aaPredicted RBP11.23□□□□□ -0.61
C9orf47-203ENST00000375851 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
C9orf47-203ENST00000375851 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 NUP37Q8NFH4 326 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 CFPP27918 469 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
C9orf47-203ENST00000375851 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 CACNA1AO00555 2505 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 C9JCJ5 164 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
C9orf47-203ENST00000375851 LINC00205P59089 165 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 ADIPOQQ15848 244 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
C9orf47-203ENST00000375851 CD5P06127 495 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 HERPUD1Q15011 391 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 ZNF56Q15929 161 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
C9orf47-203ENST00000375851 KCNS1Q96KK3 526 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 PRSS8Q16651 343 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 EFNA4P52798 201 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 SLC25A34Q6PIV7 304 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
C9orf47-203ENST00000375851 SOD3P08294 240 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms