RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 HEYLQ9NQ87 328 aaPredicted RBP9.23□□□□□ -0.93
LSM2-208ENST00000375661 ALG5Q9Y673 324 aa9.23□□□□□ -0.93
LSM2-208ENST00000375661 MFSD2BA6NFX1 497 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 K7EIM0 57 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 TRBV12-3P01733 135 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 SNCAP37840 140 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 NKX2-1P43699 371 aaPredicted RBP9.22□□□□□ -0.93
LSM2-208ENST00000375661 IL15RAQ13261 267 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 S4R3C0 116 aa9.22□□□□□ -0.93
LSM2-208ENST00000375661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.21□□□□□ -0.94
LSM2-208ENST00000375661 IGHV3-21A0A0B4J1V1 117 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 C5orf51A6NDU8 294 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 FAM25EA8MYX2 175 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 I3L2K1 104 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 CYB5BO43169 146 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 SYNGR2O43760 224 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 SIX6O95475 246 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 IGHV3-23P01764 117 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 IAPPP10997 89 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.94
LSM2-208ENST00000375661 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
LSM2-208ENST00000375661 C2orf83Q53S99 150 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 LCN12Q6JVE5 192 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 GSG1LQ6UXU4 331 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 HAPLN4Q86UW8 402 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 SLC24A4Q8NFF2 622 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 SCARB1Q8WTV0 552 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 C2orf50Q96LR7 162 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 HIPK2Q9H2X6 1198 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 TUBA4BQ9H853 241 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 THYN1Q9P016 225 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 GSKIPQ9P0R6 139 aa9.21□□□□□ -0.94
LSM2-208ENST00000375661 PEF1Q9UBV8 284 aaKnown RBP9.21□□□□□ -0.94
LSM2-208ENST00000375661 ANKRD34BA5PLL1 514 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
LSM2-208ENST00000375661 GOSR2O14653 212 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 SSNA1O43805 119 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 MED6O75586 246 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 MT-CO2P00403 227 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 MBPP02686 304 aaPredicted RBP9.2□□□□□ -0.94
LSM2-208ENST00000375661 HTR2BP41595 481 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.945e-9■■■■■ 41.1
LSM2-208ENST00000375661 KLF5Q13887 457 aaPredicted RBP9.2□□□□□ -0.94
LSM2-208ENST00000375661 ZNF502Q8TBZ5 544 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 VN1R17PQ8TDU5 208 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 MISP3Q96FF7 219 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 SIGLEC8Q9NYZ4 499 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 U3KQ87 197 aa9.2□□□□□ -0.94
LSM2-208ENST00000375661 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 WRBO00258 174 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 TMEM50AO95807 157 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 SCGB1D2O95969 90 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 IFNA10P01566 189 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 NPY1RP25929 384 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 PAX9P55771 341 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 MLANAQ16655 118 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 LINC00322Q6ZN03 302 aaPredicted RBP9.19□□□□□ -0.94
LSM2-208ENST00000375661 OR9G4Q8NGQ1 327 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 OR2K2Q8NGT1 345 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
LSM2-208ENST00000375661 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
LSM2-208ENST00000375661 CXorf58Q96LI9 332 aa9.19□□□□□ -0.94
LSM2-208ENST00000375661 FNDC4Q9H6D8 234 aaPredicted RBP9.19□□□□□ -0.94
LSM2-208ENST00000375661 RCL1Q9Y2P8 373 aaKnown RBP9.19□□□□□ -0.94
LSM2-208ENST00000375661 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 C15orf62A8K5M9 175 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 PPP5D1E7EU14 171 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 K7EPK0 472 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 BMPR1BO00238 502 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 SSSCA1O60232 199 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 CLEC3BP05452 202 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 H2BFSP57053 126 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 IL34Q6ZMJ4 242 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 SMIM8Q96KF7 97 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 CIB3Q96Q77 187 aaPredicted RBP9.18□□□□□ -0.94
LSM2-208ENST00000375661 C11orf1Q9H5F2 150 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
LSM2-208ENST00000375661 MGAT4CQ9UBM8 478 aa9.18□□□□□ -0.94
LSM2-208ENST00000375661 CORTO00230 105 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 CXCL3P19876 107 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 FCGR2BP31994 310 aaPredicted RBP9.17□□□□□ -0.94
LSM2-208ENST00000375661 GPR183P32249 361 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
LSM2-208ENST00000375661 RAB32Q13637 225 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 FCN2Q15485 313 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 NOXA1Q86UR1 476 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
LSM2-208ENST00000375661 KRTAP17-1Q9BYP8 105 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 NMES1Q9C002 83 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 PSENENQ9NZ42 101 aa9.17□□□□□ -0.94
LSM2-208ENST00000375661 LSM5Q9Y4Y9 91 aaKnown RBP9.17□□□□□ -0.94
LSM2-208ENST00000375661 OR2T8A6NH00 312 aa9.16□□□□□ -0.94
LSM2-208ENST00000375661 PMS2P5A8MQ11 134 aa9.16□□□□□ -0.94
LSM2-208ENST00000375661 H3BP45 60 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms