RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 C10orf105Q8TEF2 133 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 GATAD1Q8WUU5 269 aa19.95■□□□□ 0.78
CTSA-203ENST00000372459 SRSF8Q9BRL6 282 aaKnown RBP19.95■□□□□ 0.78
CTSA-203ENST00000372459 PLXNB1O43157 2135 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 TACC2O95359 2948 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 CD24P25063 80 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 SSBP2P81877 361 aaPredicted RBP19.94■□□□□ 0.78
CTSA-203ENST00000372459 ZNF674Q2M3X9 581 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 DYNAPQ8N1N2 210 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 SDF2L1Q9HCN8 221 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 SPTAN1Q13813 2472 aaKnown RBP19.94■□□□□ 0.78
CTSA-203ENST00000372459 CORTO00230 105 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 PAGE4O60829 102 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 CNIH1O95406 144 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 HOXA5P20719 270 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 MISP3Q96FF7 219 aa19.94■□□□□ 0.78
CTSA-203ENST00000372459 SEPSECSQ9HD40 501 aaKnown RBP19.94■□□□□ 0.78
CTSA-203ENST00000372459 MT-CO2P00403 227 aa19.93■□□□□ 0.78
CTSA-203ENST00000372459 ARL14EPLP0DKL9 152 aa19.93■□□□□ 0.78
CTSA-203ENST00000372459 APELAP0DMC3 54 aa19.93■□□□□ 0.78
CTSA-203ENST00000372459 SPNS3Q6ZMD2 512 aa19.93■□□□□ 0.78
CTSA-203ENST00000372459 F11RQ9Y624 299 aaKnown RBP19.93■□□□□ 0.78
CTSA-203ENST00000372459 COL12A1Q99715 3063 aa19.93■□□□□ 0.78
CTSA-203ENST00000372459 TGOLN2O43493 480 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 CYP2G1PQ6ZSU1 146 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 NPIPB3Q92617 1050 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 C19orf24Q9BVV8 132 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 LPAR2Q9HBW0 351 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 URGCP-MRPS24S4R325 110 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 NAV3Q8IVL0 2385 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 USP9XQ93008 2570 aaPredicted RBP19.92■□□□□ 0.78
CTSA-203ENST00000372459 TGIF2-C20orf24A0A0A6YYL0 155 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 TMEM250H0YL14 139 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 CLDN34H7C241 214 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 MFAP2P55001 183 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 CTDSP1Q9GZU7 261 aa19.92■□□□□ 0.78
CTSA-203ENST00000372459 VWC2LB2RUY7 222 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 GATA2P23769 480 aaPredicted RBP19.91■□□□□ 0.78
CTSA-203ENST00000372459 EBI3Q14213 229 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 FAM78BQ5VT40 261 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 THAP8Q8NA92 274 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 OR4F5Q8NH21 305 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 OR4F4Q96R69 305 aa19.91■□□□□ 0.78
CTSA-203ENST00000372459 IGHV4-61A0A0C4DH41 118 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 CRYGCP07315 174 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 C5orf64Q2M2E5 130 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 SPATA31B1PQ5VZV4 182 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 NIT2Q9NQR4 276 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 FUT9Q9Y231 359 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 FLNCQ14315 2725 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 COX6B1P14854 86 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 CDX1P47902 265 aaPredicted RBP19.9■□□□□ 0.78
CTSA-203ENST00000372459 C22orf15Q8WYQ4 148 aa19.9■□□□□ 0.78
CTSA-203ENST00000372459 C11orf94C9JXX5 98 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 IGHV3-48P01763 117 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 SRSF1Q07955 248 aaKnown RBP eCLIP19.89■□□□□ 0.77
CTSA-203ENST00000372459 Q8N6K4 173 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 SLC25A33Q9BSK2 321 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 NAT8Q9UHE5 227 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 WNK2Q9Y3S1 2297 aa19.89■□□□□ 0.77
CTSA-203ENST00000372459 TCRBV4S1A1TA0A5B7 111 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 FABP1P07148 127 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 FXYD3Q14802 87 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 FBLN7Q53RD9 439 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 C19orf35Q6ZS72 473 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 OR51M1Q9H341 326 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 DOK5Q9P104 306 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 ZFYVE26Q68DK2 2539 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 GCHFRP30047 84 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 FAM210BQ96KR6 192 aa19.88■□□□□ 0.77
CTSA-203ENST00000372459 MRPL36Q9P0J6 103 aaKnown RBP19.88■□□□□ 0.77
CTSA-203ENST00000372459 IGKV1D-37A0A075B6S9 117 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 OR5G3P0C626 314 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 TMEM11P17152 192 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 SAA4P35542 130 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 UBE2G2P60604 165 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 SELENOTP62341 195 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 PAX8Q06710 450 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 MIR17HGQ75NE6 70 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 PERPQ96FX8 193 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 TXNDC17Q9BRA2 123 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 GSN-AS1Q9NRJ2 163 aa19.87■□□□□ 0.77
CTSA-203ENST00000372459 TRBV24-1A0A075B6N3 115 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 NCBP2LA6PVI3 153 aaKnown RBP19.86■□□□□ 0.77
CTSA-203ENST00000372459 FAM106CPP0CH98 169 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 CST9LP1Q5W188 147 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 TECRQ9NZ01 308 aaKnown RBP19.86■□□□□ 0.77
CTSA-203ENST00000372459 ZNF462Q96JM2 2506 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 PDE6DO43924 150 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BKO60814 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BJP06899 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BOP23527 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BBP33778 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BDP58876 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BCP62807 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST2H2BEQ16778 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.86■□□□□ 0.77
CTSA-203ENST00000372459 TMEM116Q8NCL8 245 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 HIST1H2BHQ93079 126 aa19.86■□□□□ 0.77
CTSA-203ENST00000372459 AJUBAQ96IF1 538 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms