RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZNF383Q8NA42 475 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 FOXI3A8MTJ6 420 aaPredicted RBP11.38□□□□□ -0.59
CTR9-201ENST00000361367 PHOX2AO14813 284 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 IGKV1-5P01602 117 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 CX3CL1P78423 397 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 HERPUD1Q15011 391 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 TWIST1Q15672 202 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
CTR9-201ENST00000361367 H0YJW9 148 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 APCSP02743 223 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
CTR9-201ENST00000361367 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 MIR17HGQ75NE6 70 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 LINC01356Q8N9X3 169 aa11.38□□□□□ -0.59
CTR9-201ENST00000361367 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 TRAV41A0A0B4J266 112 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
CTR9-201ENST00000361367 LINC00205P59089 165 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 PRSS1P07477 247 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 NMSQ5H8A3 153 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 RRN3P1Q2M238 152 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 RNF125Q96EQ8 232 aa11.37□□□□□ -0.59
CTR9-201ENST00000361367 MSMBP08118 114 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 SAA4P35542 130 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 Q5PR19 223 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 HLA-DRB1P01911 266 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 MDKP21741 143 aaPredicted RBP11.36□□□□□ -0.59
CTR9-201ENST00000361367 CD81P60033 236 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 ZNF506Q5JVG8 444 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 OR1P1Q8NH06 330 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 TBL2Q9Y4P3 447 aaKnown RBP11.36□□□□□ -0.59
CTR9-201ENST00000361367 M0R2Z0 102 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 ERVK11-1P61568 191 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 PIEZO2Q9H5I5 2752 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 ANOS1P23352 680 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
CTR9-201ENST00000361367 MYOD1P15172 320 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 CFHR2P36980 270 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
CTR9-201ENST00000361367 TRAV34A0A0B4J273 112 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 TCRBV4S1A1TA0A5B7 111 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
CTR9-201ENST00000361367 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
CTR9-201ENST00000361367 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 FREM1Q5H8C1 2179 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 PRB1P04280 392 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 PEMTQ9UBM1 199 aa11.35□□□□□ -0.59
CTR9-201ENST00000361367 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 MT-ND6P03923 174 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 AGAP20933 346 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
CTR9-201ENST00000361367 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 SIGLEC9Q9Y336 463 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
CTR9-201ENST00000361367 IGLV3-1P01715 115 aa11.34□□□□□ -0.59
CTR9-201ENST00000361367 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
CTR9-201ENST00000361367 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 C12orf57Q99622 126 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 PEX7O00628 323 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
CTR9-201ENST00000361367 RELBQ01201 579 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 GATA3P23771 443 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 ATP5G3P48201 142 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 KLF17Q5JT82 389 aaPredicted RBP11.33□□□□□ -0.6
CTR9-201ENST00000361367 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 FAM71F2Q6NXP2 309 aa11.33□□□□□ -0.6
CTR9-201ENST00000361367 ITLN2Q8WWU7 325 aaPredicted RBP11.33□□□□□ -0.6
CTR9-201ENST00000361367 SOD3P08294 240 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 CD99P14209 185 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 TEX36Q5VZQ5 186 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 GCGP01275 180 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms