RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 UNQ5815/PRO19632Q6UWF5 114 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 SPNS3Q6ZMD2 512 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 TMUB1Q9BVT8 246 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 PXMP4Q9Y6I8 212 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 MFSD2BA6NFX1 497 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 K7EIM0 57 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 RPP25LQ8N5L8 163 aaKnown RBP18.22■□□□□ 0.51
SDF4-202ENST00000360001 FAM110DQ8TAY7 271 aaPredicted RBP18.22■□□□□ 0.51
SDF4-202ENST00000360001 SLC45A2Q9UMX9 530 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 OTOGQ6ZRI0 2925 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 SOX15O60248 233 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 YIF1AO95070 293 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 MBP02144 154 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 OR10J1P30954 320 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 RPL29P47914 159 aaKnown RBP18.21■□□□□ 0.51
SDF4-202ENST00000360001 ZNF726P1Q15940 193 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 AKIRIN2Q53H80 203 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 THAP8Q8NA92 274 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 TMEM116Q8NCL8 245 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 KCNIP2Q9NS61 270 aa18.21■□□□□ 0.51
SDF4-202ENST00000360001 SONP18583 2426 aaKnown RBP18.21■□□□□ 0.51
SDF4-202ENST00000360001 IGKV1D-37A0A075B6S9 117 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 CRIP2P52943 208 aaPredicted RBP18.21■□□□□ 0.5
SDF4-202ENST00000360001 BLCAPP62952 87 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 PRR20EP86478 221 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 PRR20CP86479 221 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 PRR20DP86480 221 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 PRR20BP86481 221 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 PRR20AP86496 221 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 C9orf152Q5JTZ5 239 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 STPG3Q8N7X2 389 aa18.21■□□□□ 0.5
SDF4-202ENST00000360001 RCC1LQ96I51 464 aaKnown RBP18.21■□□□□ 0.5
SDF4-202ENST00000360001 G3V318 75 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 TSPAN15O95858 294 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 IGHG2P01859 326 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 H2AFB1P0C5Y9 115 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 M6PRP20645 277 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 GCSAMLQ5JQS6 135 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 SSX7Q7RTT5 188 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 MARC2Q969Z3 335 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 TMEM68Q96MH6 324 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 YAE1D1Q9NRH1 226 aa18.2■□□□□ 0.5
SDF4-202ENST00000360001 ANK3Q12955 4377 aaKnown RBP18.19■□□□□ 0.5
SDF4-202ENST00000360001 TSPAN9O75954 239 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 LINC00869P0C866 280 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 B2MP61769 119 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 C19orf54Q5BKX5 351 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 OR10G4Q8NGN3 311 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 OR10G9Q8NGN4 311 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 OR10G7Q8NGN6 311 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 BTBD17A6NE02 478 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 ACOT6Q3I5F7 207 aaPredicted RBP18.19■□□□□ 0.5
SDF4-202ENST00000360001 SPSB3Q6PJ21 355 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 BPIFCQ8NFQ6 507 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 TNFRSF19Q9NS68 423 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 SLC39A9Q9NUM3 307 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 VPREB3Q9UKI3 123 aa18.19■□□□□ 0.5
SDF4-202ENST00000360001 CYB5BO43169 146 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 IGF1P05019 195 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 KLK9Q2XQG4 91 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 IL34Q6ZMJ4 242 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 Q6ZS46 218 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 EIF4E3Q8N5X7 224 aaKnown RBP18.18■□□□□ 0.5
SDF4-202ENST00000360001 KLK9Q9UKQ9 250 aa18.18■□□□□ 0.5
SDF4-202ENST00000360001 HOXA3O43365 443 aaPredicted RBP18.17■□□□□ 0.5
SDF4-202ENST00000360001 GATA2P23769 480 aaPredicted RBP18.17■□□□□ 0.5
SDF4-202ENST00000360001 CYP2G1PQ6ZSU1 146 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 SLC35E3Q7Z769 313 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 OR4X1Q8NH49 305 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 SFT2D1Q8WV19 159 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 MBD3L1Q8WWY6 194 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 TRAV41A0A0B4J266 112 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 A0A1B0GV50 99 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 ZFP92A6NM28 416 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 NUDT19A8MXV4 375 aa18.17■□□□□ 0.5
SDF4-202ENST00000360001 SRP14P37108 136 aaKnown RBP18.17■□□□□ 0.5
SDF4-202ENST00000360001 TCRBV4S1A1TA0A5B7 111 aa18.16■□□□□ 0.5
SDF4-202ENST00000360001 SIGLECL1Q8N7X8 197 aa18.16■□□□□ 0.5
SDF4-202ENST00000360001 LINC00527Q9UJ94 153 aa18.16■□□□□ 0.5
SDF4-202ENST00000360001 TRAV1-1A0A0B4J248 108 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 RAB19A4D1S5 217 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 OR2J3O76001 311 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 NDUFB8O95169 186 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 CCL20P78556 96 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 ZNF90Q03938 601 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 FAM122CQ6P4D5 195 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 SLC25A22Q9H936 323 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 THYN1Q9P016 225 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 EIF3GO75821 320 aaKnown RBP eCLIP18.15■□□□□ 0.5
SDF4-202ENST00000360001 LCN15Q6UWW0 184 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 TRGV9Q99603 122 aa18.15■□□□□ 0.5
SDF4-202ENST00000360001 ACTR3CQ9C0K3 210 aaPredicted RBP18.15■□□□□ 0.5
SDF4-202ENST00000360001 GSX1Q9H4S2 264 aaPredicted RBP18.15■□□□□ 0.5
SDF4-202ENST00000360001 CTXND1A0A1B0GTU2 59 aa18.14■□□□□ 0.49
SDF4-202ENST00000360001 SEC14L6B5MCN3 397 aa18.14■□□□□ 0.49
SDF4-202ENST00000360001 HIST1H1BP16401 226 aaKnown RBP18.14■□□□□ 0.49
SDF4-202ENST00000360001 DEFA5Q01523 94 aa18.14■□□□□ 0.49
SDF4-202ENST00000360001 TRBV9A0A0B4J1U6 114 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 IGLC1P0CG04 106 aa18.13■□□□□ 0.49
SDF4-202ENST00000360001 COMMD1Q8N668 190 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms