RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
MUC1-204ENST00000343256 FKBP11Q9NYL4 201 aa12.41□□□□□ -0.42
MUC1-204ENST00000343256 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
MUC1-204ENST00000343256 RAB3BP20337 219 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 SPINK9Q5DT21 86 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 KRTAP1-5Q9BYS1 174 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
MUC1-204ENST00000343256 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
MUC1-204ENST00000343256 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 CASQ2O14958 399 aaPredicted RBP12.39□□□□□ -0.43
MUC1-204ENST00000343256 PGLYRP1O75594 196 aaPredicted RBP12.39□□□□□ -0.43
MUC1-204ENST00000343256 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
MUC1-204ENST00000343256 KCTD21Q4G0X4 260 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
MUC1-204ENST00000343256 FRZBQ92765 325 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
MUC1-204ENST00000343256 ACOT13Q9NPJ3 140 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
MUC1-204ENST00000343256 SRRM2Q9UQ35 2752 aaKnown RBP12.38□□□□□ -0.43
MUC1-204ENST00000343256 TRAV1-2A0A0B4J238 106 aa12.38□□□□□ -0.43
MUC1-204ENST00000343256 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
MUC1-204ENST00000343256 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
MUC1-204ENST00000343256 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
MUC1-204ENST00000343256 GLMPQ8WWB7 406 aa12.38□□□□□ -0.43
MUC1-204ENST00000343256 MYL9P24844 172 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 EIF2B2P49770 351 aaKnown RBP12.37□□□□□ -0.43
MUC1-204ENST00000343256 CCL18P55774 89 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 ERHP84090 104 aaKnown RBP12.37□□□□□ -0.43
MUC1-204ENST00000343256 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 CADM3Q8N126 398 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 LGALS14Q8TCE9 139 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 TSC22D3Q99576 134 aa12.37□□□□□ -0.43
MUC1-204ENST00000343256 HBE1P02100 147 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 HERV-K104P61576 105 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 MLANAQ16655 118 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 TIGITQ495A1 244 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 C1orf158Q8N1D5 194 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 PACRGLQ8N7B6 248 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 U3KQE9 123 aa12.36□□□□□ -0.43
MUC1-204ENST00000343256 J3QL48 77 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 CLN5O75503 358 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 BTF3P20290 206 aaKnown RBP12.35□□□□□ -0.43
MUC1-204ENST00000343256 ZNF709Q8N972 641 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 MGLLQ99685 303 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
MUC1-204ENST00000343256 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 Q9H8V8 135 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
MUC1-204ENST00000343256 F5H768 121 aa12.34□□□□□ -0.43
MUC1-204ENST00000343256 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
MUC1-204ENST00000343256 AP2S1P53680 142 aaPredicted RBP12.34□□□□□ -0.43
MUC1-204ENST00000343256 RRN3P1Q2M238 152 aa12.34□□□□□ -0.43
MUC1-204ENST00000343256 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
MUC1-204ENST00000343256 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
MUC1-204ENST00000343256 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
MUC1-204ENST00000343256 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
MUC1-204ENST00000343256 PRM2P04554 102 aa12.33□□□□□ -0.44
MUC1-204ENST00000343256 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
MUC1-204ENST00000343256 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
MUC1-204ENST00000343256 OR4B1Q8NGF8 309 aa12.33□□□□□ -0.44
MUC1-204ENST00000343256 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
MUC1-204ENST00000343256 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 MEIS3P1A6NDR6 274 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 SCGNO76038 276 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 SNCAP37840 140 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
MUC1-204ENST00000343256 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 H2BFWTQ7Z2G1 175 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 OR5AP2Q8NGF4 316 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
MUC1-204ENST00000343256 C8orf4Q9NR00 106 aa12.32□□□□□ -0.44
MUC1-204ENST00000343256 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 DEFB130BP0DP73 79 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 DEFB130AP0DP74 79 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 OPRK1P41145 380 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 CLINT1Q14677 625 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 LINC00052Q96N35 136 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 SAV1Q9H4B6 383 aaPredicted RBP12.31□□□□□ -0.44
MUC1-204ENST00000343256 SEPSECSQ9HD40 501 aaKnown RBP12.31□□□□□ -0.44
MUC1-204ENST00000343256 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 EHFQ9NZC4 300 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
MUC1-204ENST00000343256 RGS10O43665 173 aa12.3□□□□□ -0.44
MUC1-204ENST00000343256 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
MUC1-204ENST00000343256 ALDH3B2P48448 385 aa12.3□□□□□ -0.44
MUC1-204ENST00000343256 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
MUC1-204ENST00000343256 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms