RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C8orf88P0DMB2 117 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 MFAP2P55001 183 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 CD81P60033 236 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 ANKRD55Q3KP44 614 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 SLC35G3Q8N808 338 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 ZNF431Q8TF32 576 aaPredicted RBP10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 TMEM190Q8WZ59 177 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 C20orf85Q9H1P6 137 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 NAA60Q9H7X0 242 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 CACFD1Q9UGQ2 172 aa10.07□□□□□ -0.8
SIRPB3P-201ENST00000340424 KMT2CQ8NEZ4 4911 aaKnown RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 TEX13DA0A0J9YY54 714 aaPredicted RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 CORTO00230 105 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 CDS2O95674 445 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 FAUP35544 74 aaKnown RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 SNCAP37840 140 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 SUB1P53999 127 aaKnown RBP eCLIP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 RELQ04864 619 aaPredicted RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 FAAP20Q6NZ36 180 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 SLC16A13Q7RTY0 426 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 UXS1Q8NBZ7 420 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 RNASE11Q8TAA1 199 aaKnown RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 RCHY1Q96PM5 261 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 RTBDNQ9BSG5 229 aaPredicted RBP10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 C5orf66Q9H5L9 145 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
SIRPB3P-201ENST00000340424 CRYM-AS1A6NIL9 109 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 ZNF785A8K8V0 405 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 G3V3Q6 166 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 I3L2K1 104 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 K7EMT4 169 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 NUPL2O15504 423 aaKnown RBP10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 IFNA17P01571 189 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 GIPP09681 153 aaPredicted RBP10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 OR5AC1P0C628 307 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 C4BPBP20851 252 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 MFAP4P55083 255 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 GUCA2BQ16661 112 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 SP6Q3SY56 376 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 AARDQ4LEZ3 155 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 TM4SF20Q53R12 229 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 Q56UQ5 140 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 OR51S1Q8NGJ8 323 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 OR52E5Q8NH55 327 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 GLYATL2Q8WU03 294 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 MISP3Q96FF7 219 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 ENY2Q9NPA8 101 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 MLXQ9UH92 298 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 KCNIP3Q9Y2W7 256 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 U3KQ87 197 aa10.05□□□□□ -0.8
SIRPB3P-201ENST00000340424 C15orf62A8K5M9 175 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 F8W735 103 aaPredicted RBP10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 NDUFB6O95139 128 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 CXCL3P19876 107 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 CCR6P51684 374 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 AP2S1P53680 142 aaPredicted RBP10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 CLLU1Q5K131 121 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 BTNL8Q6UX41 500 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 RBPMS2Q6ZRY4 209 aaKnown RBP10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 ZNF680Q8NEM1 530 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 GALNT14Q96FL9 552 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.04□□□□□ -0.8
SIRPB3P-201ENST00000340424 IGHV3-21A0A0B4J1V1 117 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 C3orf84H3BNL1 204 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 SMLR1H3BR10 107 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 MT-CO2P00403 227 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 IFNA7P01567 189 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 CTSGP08311 255 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 EDN2P20800 178 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 ADMP35318 185 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 NPBWR1P48145 328 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 HOXA1P49639 335 aaPredicted RBP10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 SPCS3P61009 180 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 RAP2BP61225 183 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 SRPXP78539 464 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 WDR89Q96FK6 387 aaPredicted RBP10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 SPAG8Q99932 426 aaPredicted RBP10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 CHRDL1Q9BU40 450 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
SIRPB3P-201ENST00000340424 DNAH7Q8WXX0 4024 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms