RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 RARRES2Q99969 163 aa10.3□□□□□ -0.76
FN1-202ENST00000336916 UPK2O00526 184 aa10.3□□□□□ -0.76
FN1-202ENST00000336916 RNASE1P07998 156 aaKnown RBP10.3□□□□□ -0.76
FN1-202ENST00000336916 RFPL3SP0C7P2 107 aa10.3□□□□□ -0.76
FN1-202ENST00000336916 NEUROG3Q9Y4Z2 214 aa10.3□□□□□ -0.76
FN1-202ENST00000336916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
FN1-202ENST00000336916 MESP2Q0VG99 397 aa10.3□□□□□ -0.76
FN1-202ENST00000336916 PLAUP00749 431 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 TDGF1P13385 188 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 FER1L6-AS1Q8NA97 138 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 FBXL15Q9H469 300 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 CCL1P22362 96 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 PLP1P60201 277 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 RUNX1Q01196 453 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 BEND2Q8NDZ0 799 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 ABCA2Q9BZC7 2435 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 PSMB11A5LHX3 300 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
FN1-202ENST00000336916 SLC25A16P16260 332 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 SEC11AP67812 179 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 RPP21Q9H633 154 aaKnown RBP10.29□□□□□ -0.76
FN1-202ENST00000336916 A0A087WWC5 75 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 A1L4Q6 167 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 C12orf77C9JDV5 145 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 H7C2G1 150 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 ZXDCQ2QGD7 858 aaPredicted RBP10.29□□□□□ -0.76
FN1-202ENST00000336916 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
FN1-202ENST00000336916 UMODP07911 640 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 A0A1W2PP11 408 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 SIGLEC5O15389 551 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 PLNP26678 52 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 PAX8Q06710 450 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 MUC4Q99102 2169 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
FN1-202ENST00000336916 SRIP30626 198 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 HIVEP2P31629 2446 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 MORN2Q502X0 79 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 M0R381 172 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 RNF224P0DH78 156 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
FN1-202ENST00000336916 CLEC19AQ6UXS0 136 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 C9orf106Q8NAJ2 232 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 SDHCQ99643 169 aaPredicted RBP10.28□□□□□ -0.76
FN1-202ENST00000336916 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
FN1-202ENST00000336916 FAM223BA6NKX1 122 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 KLF4O43474 513 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 FAM223AQ8IWN6 122 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 TMEM105Q8N8V8 129 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
FN1-202ENST00000336916 RPL39P5Q59GN2 51 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 RFLNBQ8N5W9 214 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 LEAP2Q969E1 77 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 Q9H3A6 140 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 PLSCR4Q9NRQ2 329 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 ATP1A1-AS1Q5TC04 95 aa10.27□□□□□ -0.76
FN1-202ENST00000336916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.27□□□□□ -0.77
FN1-202ENST00000336916 TNFSF13O75888 250 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
FN1-202ENST00000336916 C7orf71A4D174 169 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 RNF125Q96EQ8 232 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 C9JCJ5 164 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 NTN1O95631 604 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 TEX38Q6PEX7 206 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 PKIGQ9Y2B9 76 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 TRBV6-7A0A0A0MS04 114 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.77
FN1-202ENST00000336916 RRHO14718 337 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 ZNF660Q6AZW8 331 aaPredicted RBP10.26□□□□□ -0.77
FN1-202ENST00000336916 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 MARVELD3Q96A59 401 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 OVOL2Q9BRP0 275 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 OR10S1Q8NGN2 331 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 CD7P09564 240 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 CBLN2Q8IUK8 224 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 PEF1Q9UBV8 284 aaKnown RBP10.26□□□□□ -0.77
FN1-202ENST00000336916 ZFYVE26Q68DK2 2539 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■□□□□ 8.6
FN1-202ENST00000336916 PEAR1Q5VY43 1037 aaPredicted RBP10.26□□□□□ -0.77
FN1-202ENST00000336916 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
FN1-202ENST00000336916 AMELYQ99218 206 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 NRN1Q9NPD7 142 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 CXCL2P19875 107 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 ATP5L2Q7Z4Y8 100 aa10.26□□□□□ -0.77
FN1-202ENST00000336916 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
FN1-202ENST00000336916 SAA2-SAA4A0A096LPE2 208 aa10.25□□□□□ -0.77
FN1-202ENST00000336916 SAA2P0DJI9 122 aaPredicted RBP10.25□□□□□ -0.77
FN1-202ENST00000336916 RHOGP84095 191 aa10.25□□□□□ -0.77
FN1-202ENST00000336916 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms