RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PNKDQ8N490 385 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 BEND2Q8NDZ0 799 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ISLRO14498 428 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ZNF253O75346 499 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ETFRF1Q6IPR1 90 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TMEM167AQ8TBQ9 72 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 DYSFO75923 2080 aa9.5□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PTPRBP23467 1997 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 NUPR1O60356 82 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SNRPCP09234 159 aaKnown RBP9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 BRS3P32247 399 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PPOXP50336 477 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 KIAA1644Q3SXP7 199 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 RPH3ALQ9UNE2 315 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 REG1AP05451 166 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 AMTP48728 403 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 KRTDAPP60985 99 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CX3CL1P78423 397 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SPTA1P02549 2419 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PLAUP00749 431 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PYYP10082 97 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CD33P20138 364 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TAS2R60P59551 318 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CBLN4Q9NTU7 201 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 HCP5Q6MZN7 132 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 BLNKQ8WV28 456 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PMCHP20382 165 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TNXAQ16473 311 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CDC42EP3Q9UKI2 254 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 M0R143 59 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 AMY1AP04745 511 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 RNF224P0DH78 156 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 LGALS7P47929 136 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 C1orf194Q5T5A4 169 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 LYPD2Q6UXB3 125 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 LINC00305Q7Z4B0 112 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SLC25A5P05141 298 aaKnown RBP9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 APELAP0DMC3 54 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 RBPJQ06330 500 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PLGLAQ15195 96 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PERPQ96FX8 193 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SSBP3Q9BWW4 388 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TNFRSF19Q9NS68 423 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PIEZO2Q9H5I5 2752 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 APCSP02743 223 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PEX7O00628 323 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SRIP30626 198 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 MFAP2P55001 183 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 Q0VG73 95 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 ASPMQ8IZT6 3477 aa9.47□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 E7EUB6 86 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 GNB4Q9HAV0 340 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 INSIG2Q9Y5U4 225 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 MGAQ8IWI9 3026 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 MOSP00540 346 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 NTF3P20783 257 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 PRRX1P54821 245 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 BORCS7Q96B45 105 aa9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.89
CSPG4P4Y-201ENST00000333235 FRMD6-AS1P0C7T7 363 aa9.46□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 Q6ZWC4 215 aa9.46□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 APC2O95996 2303 aa9.45□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 IGHV3-21A0A0B4J1V1 117 aa9.45□□□□□ -0.9
CSPG4P4Y-201ENST00000333235 IZUMO1RA6ND01 250 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms