RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 FN1P02751 2386 aaKnown RBP13.12□□□□□ -0.31
SYNM-201ENST00000328642 HTN1P15515 57 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 CBLN1P23435 193 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 ARL3P36405 182 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.11□□□□□ -0.31
SYNM-201ENST00000328642 PF4V1P10720 104 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 CRISP2P16562 243 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 AGAP20933 346 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 LMO1P25800 156 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 GNG5P63218 68 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 RPEL1Q2QD12 228 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 IGFL2Q6UWQ7 119 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 DPPA3Q6W0C5 159 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 HAPLN4Q86UW8 402 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 HIGD1AQ9Y241 93 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
SYNM-201ENST00000328642 S100A8P05109 93 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
SYNM-201ENST00000328642 Q6ZS49 121 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 CHD3Q12873 2000 aaKnown RBP13.11□□□□□ -0.31
SYNM-201ENST00000328642 AMTP48728 403 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 CENPWQ5EE01 88 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 TMEM219Q86XT9 240 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
SYNM-201ENST00000328642 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
SYNM-201ENST00000328642 AMY1AP04745 511 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 AREGP15514 252 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 HIST1H1BP16401 226 aaKnown RBP13.1□□□□□ -0.31
SYNM-201ENST00000328642 HLA-DRB5Q30154 266 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 SPSB3Q6PJ21 355 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 GGTLC1Q9BX51 225 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 EFNB3Q15768 340 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 IGHV2-26A0A0B4J1V2 119 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 LYL1P12980 280 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 CCKARP32238 428 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 CA7P43166 264 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
SYNM-201ENST00000328642 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
SYNM-201ENST00000328642 CXCL1P09341 107 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNM-201ENST00000328642 KRTAP27-1Q3LI81 207 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 CYP2G1PQ6ZSU1 146 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
SYNM-201ENST00000328642 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 SRRM4A7MD48 611 aaKnown RBP13.09□□□□□ -0.31
SYNM-201ENST00000328642 C15orf65H3BRN8 121 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
SYNM-201ENST00000328642 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 IBA57Q5T440 356 aaKnown RBP13.09□□□□□ -0.31
SYNM-201ENST00000328642 MGST2Q99735 147 aa13.09□□□□□ -0.31
SYNM-201ENST00000328642 B4DEV8 164 aa13.08□□□□□ -0.31
SYNM-201ENST00000328642 IGHV3-11P01762 117 aa13.08□□□□□ -0.31
SYNM-201ENST00000328642 OR4A5Q8NH83 315 aa13.08□□□□□ -0.31
SYNM-201ENST00000328642 CCDC144NLQ6NUI1 221 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 ORM1P02763 201 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 THBDP07204 575 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 CBLN4Q9NTU7 201 aa13.08□□□□□ -0.32
SYNM-201ENST00000328642 P01737 135 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 SFTPCP11686 197 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 Q8NA96 180 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 Q8NFD4 153 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 DUX5Q96PT3 197 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
SYNM-201ENST00000328642 IGLV3-9A0A075B6K5 115 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 GPR183P32249 361 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 TXN2Q99757 166 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 NBEAP1P0C6P0 100 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 CCL19Q99731 98 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 AKAP13Q12802 2813 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 COLCA2A8K830 154 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYNM-201ENST00000328642 CTSZQ9UBR2 303 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
SYNM-201ENST00000328642 H0YJW9 148 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 TGOLN2O43493 480 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms