RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SCRT1Q9BWW7 348 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 NAV2Q8IVL1 2488 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■□□ 17.7
HERPUD1-201ENST00000300302 ABCA12Q86UK0 2595 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 F8W036 122 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 IFNA1P01562 189 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 GCSAMLQ5JQS6 135 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 CYP2G1PQ6ZSU1 146 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 C5orf56Q8N8D9 126 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 TMEM116Q8NCL8 245 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 PIFOQ8TCI5 191 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 GNG13Q9P2W3 67 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 APCP25054 2843 aa12.43□□□□□ -0.42
HERPUD1-201ENST00000300302 TCRBV4S1A1TA0A5B7 111 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 IGHV3-48P01763 117 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 APOC3P02656 99 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 LINC00869P0C866 280 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 ADCYAP1P18509 176 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 SELENOTP62341 195 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 RHOBP62745 196 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 NDPQ00604 133 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 HAGHQ16775 308 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 CYB5R2Q6BCY4 276 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 DMRT1Q9Y5R6 373 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 RBMS3Q6XE24 437 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 TMEM219Q86XT9 240 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 RARRES2Q99969 163 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
HERPUD1-201ENST00000300302 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 H3BUX3 64 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 I3L2K1 104 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 PPT1P50897 306 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 KHDC3LQ587J8 217 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 C10orf91Q5T1B1 145 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 NANPQ8TBE9 248 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 HSPB9Q9BQS6 159 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 SLC35B3Q9H1N7 401 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 THYN1Q9P016 225 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 MRPL36Q9P0J6 103 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 MAP1AP78559 2803 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 CR1P17927 2039 aa12.41□□□□□ -0.42
HERPUD1-201ENST00000300302 C9JQL5 133 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 TRGV9Q99603 122 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 IGKV1D-37A0A075B6S9 117 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 M0QZK8 103 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 HSPB1P04792 205 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 BCL2P10415 239 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 TAGLN2P37802 199 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 IQCF2Q8IXL9 164 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 WFDC11Q8NEX6 87 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 CARHSP1Q9Y2V2 147 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-201ENST00000300302 IGLV11-55A0A075B6I3 123 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 IGHV3-21A0A0B4J1V1 117 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 A6NDX4 124 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 EIF3GO75821 320 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 CXorf1O96002 111 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 PSMB3P49720 205 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 DEFA5Q01523 94 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 ICAM4Q14773 271 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 C16orf82Q7Z2V1 217 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 SLC35E3Q7Z769 313 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 SVBPQ8N300 66 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 RNF2Q99496 336 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 VAX2Q9UIW0 290 aa12.39□□□□□ -0.43
HERPUD1-201ENST00000300302 K7EIM0 57 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 ATP6V0E1O15342 81 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 STAG3L2P0CL84 134 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 ZNF90Q03938 601 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 LY6EQ16553 131 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 OR5T1Q8NG75 326 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 OR1L4Q8NGR5 311 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 PFDN5Q99471 154 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
HERPUD1-201ENST00000300302 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms