RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CAV2P51636 162 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 NKX2-5P52952 324 aaPredicted RBP5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 VAMP2P63027 116 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 KIAA0141Q14154 515 aaPredicted RBP5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 BSXQ3C1V8 233 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 ACOT7LQ6ZUV0 252 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 SLC16A13Q7RTY0 426 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 CENPVQ7Z7K6 275 aaPredicted RBP5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 TTC9CQ8N5M4 171 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 KLHL30-AS1Q8NEE0 82 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 OR11H4Q8NGC9 324 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 OR2T35Q8NGX2 323 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 DCUN1D4Q92564 292 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF414Q96IQ9 312 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 FBXL7Q9UJT9 491 aa5.02□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHV4OR15-8A0A075B7B6 117 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 A0A087WW49 117 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 SMCO3A2RU48 225 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 PMS2P5A8MQ11 134 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 FAM90A26D6RGX4 464 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 PRSS46E5RG02 174 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 I3L2K1 104 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 DEDDO75618 318 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 IGHG4P01861 327 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 CRYGCP07315 174 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 OR8U8P0C7N1 319 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 DEFA4P12838 97 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 PSMB8P28062 276 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 GPR183P32249 361 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 RND2P52198 227 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 RPL15P61313 204 aaKnown RBP5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 RPL23AP62750 156 aaKnown RBP5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 SLC35B1P78383 322 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 EWSR1Q01844 656 aaKnown RBP eCLIP5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 FOXE3Q13461 319 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 CLINT1Q14677 625 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 C15orf32Q32M92 178 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 PDLIM3Q53GG5 364 aaPredicted RBP5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 ETV3LQ6ZN32 361 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 AKAP14Q86UN6 197 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM217Q8N7C4 229 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 UBAC2Q8NBM4 344 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 OR4X2Q8NGF9 303 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 MYOZ3Q8TDC0 251 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM158Q8WZ71 300 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 ACY3Q96HD9 319 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 NMES1Q9C002 83 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 WFDC1Q9HC57 220 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 FKBP11Q9NYL4 201 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 RFNGQ9Y644 331 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 MXRA5Q9NR99 2828 aa5.01□□□□□ -1.61
DEPDC4-201ENST00000299185 TRBV9A0A0B4J1U6 114 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 PIGBOS1A0A0B4J2F0 54 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 UBE2L5PA0A1B0GUS4 154 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 RNF222A6NCQ9 220 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 OR2T8A6NH00 312 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 MED6O75586 246 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 IFNA4P05014 189 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 SNCAP37840 140 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 OPRK1P41145 380 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 RAB9AP51151 201 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 RAP2BP61225 183 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ERHP84090 104 aaKnown RBP5□□□□□ -1.61
DEPDC4-201ENST00000299185 FOXL1Q12952 345 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 TIGITQ495A1 244 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 AKIRIN2Q53H80 203 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 C2orf83Q53S99 150 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 Q56UQ5 140 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ACSM6Q6P461 480 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 PRSS54Q6PEW0 395 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM14EPQ6UXP3 125 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 CLEC19AQ6UXS0 136 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 C12orf54Q6X4T0 127 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 TMEM252Q8N6L7 170 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF491Q8N8L2 437 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 OR1P1Q8NH06 330 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF502Q8TBZ5 544 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ASB13Q8WXK3 278 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 SMIM8Q96KF7 97 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 CHRDL1Q9BU40 450 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF580Q9UK33 172 aa5□□□□□ -1.61
DEPDC4-201ENST00000299185 STRAPQ9Y3F4 350 aaKnown RBP5□□□□□ -1.61
DEPDC4-201ENST00000299185 INS-IGF2F8WCM5 200 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 BMPR1BO00238 502 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 ARPC5O15511 151 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 ZNF207O43670 478 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 EIF3GO75821 320 aaKnown RBP eCLIP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 ELANEP08246 267 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 LGALS1P09382 135 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 CXCL2P19875 107 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 HTR2BP41595 481 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 AP2S1P53680 142 aaPredicted RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 CYCSP99999 105 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 NHLH2Q02577 135 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 AKR1C1Q04828 323 aa4.99□□□□□ -1.61
DEPDC4-201ENST00000299185 ATP5G2Q06055 141 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms