RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TSPAN9O75954 239 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 RND2P52198 227 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 UBE2G2P60604 165 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 FAM90A2PQ658T7 463 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 BRD3OSQ6XYD6 125 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 GSX1Q9H4S2 264 aaPredicted RBP20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 VAX2Q9UIW0 290 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 FXYD3Q14802 87 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 MIR17HGQ75NE6 70 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 ZANQ9Y493 2812 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 NPFFO15130 113 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 KIAA0141Q14154 515 aaPredicted RBP20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 PVRIGQ6DKI7 326 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 SLC35E3Q7Z769 313 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 ZNF114Q8NC26 417 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 TBL2Q9Y4P3 447 aaKnown RBP20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 F11RQ9Y624 299 aaKnown RBP20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 TMEM11P17152 192 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 CTAG1AP78358 180 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 KLF17Q5JT82 389 aaPredicted RBP20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 MALSU1Q96EH3 234 aa20.35■□□□□ 0.85
SDCCAG3-201ENST00000298537 STAG3L2P0CL84 134 aa20.34■□□□□ 0.85
SDCCAG3-201ENST00000298537 STAG3L3P0CL85 134 aa20.34■□□□□ 0.85
SDCCAG3-201ENST00000298537 FAM78BQ5VT40 261 aa20.34■□□□□ 0.85
SDCCAG3-201ENST00000298537 H3BQ15 152 aa20.33■□□□□ 0.85
SDCCAG3-201ENST00000298537 EBI3Q14213 229 aa20.33■□□□□ 0.85
SDCCAG3-201ENST00000298537 OR1P1Q8NH06 330 aa20.33■□□□□ 0.85
SDCCAG3-201ENST00000298537 TMEM37Q8WXS4 190 aa20.33■□□□□ 0.85
SDCCAG3-201ENST00000298537 RPS10P5Q9NQ39 176 aa20.33■□□□□ 0.85
SDCCAG3-201ENST00000298537 TRAV40A0A0B4J280 105 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 OOSP1A8MZH6 123 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 CX3CL1P78423 397 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 MEF2BQ02080 365 aaPredicted RBP20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 MORN5Q5VZ52 161 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 MAPK1IP1LQ8NDC0 245 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 WNT10AQ9GZT5 417 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 DOK5Q9P104 306 aa20.33■□□□□ 0.84
SDCCAG3-201ENST00000298537 C7orf77A4D0Y5 90 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 MT-CO2P00403 227 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 SPNS3Q6ZMD2 512 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 CYP2G1PQ6ZSU1 146 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 IGHV4-38-2P0DP08 117 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 CLEC12BQ2HXU8 276 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 ASPHD1Q5U4P2 390 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 KCNIP2Q9NS61 270 aa20.32■□□□□ 0.84
SDCCAG3-201ENST00000298537 SH2D7A6NKC9 451 aaPredicted RBP20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 IFNA1P01562 189 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 CRYGCP07315 174 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 ATP5G3P48201 142 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 RBMS3Q6XE24 437 aaKnown RBP20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 PSMB3P49720 205 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 PMS2P11Q13670 270 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 OR4F5Q8NH21 305 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 OR4F4Q96R69 305 aa20.31■□□□□ 0.84
SDCCAG3-201ENST00000298537 HIST2H2BCQ6DN03 193 aa20.3■□□□□ 0.84
SDCCAG3-201ENST00000298537 S4R3C0 116 aa20.3■□□□□ 0.84
SDCCAG3-201ENST00000298537 DOPEY2Q9Y3R5 2298 aa20.3■□□□□ 0.84
SDCCAG3-201ENST00000298537 RHOBP62745 196 aa20.3■□□□□ 0.84
SDCCAG3-201ENST00000298537 Q8N9W7 124 aa20.3■□□□□ 0.84
SDCCAG3-201ENST00000298537 OR51G1Q8NGK1 321 aa20.29■□□□□ 0.84
SDCCAG3-201ENST00000298537 TRAV5A0A0B4J249 113 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 PSMB11A5LHX3 300 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 AVPP01185 164 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 NPPCP23582 126 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 THAP8Q8NA92 274 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 UHRF2Q96PU4 802 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 HSPB9Q9BQS6 159 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 NAV2Q8IVL1 2488 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 TCRBV4S1A1TA0A5B7 111 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 MRPL41Q8IXM3 137 aaKnown RBP20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 ISOC2Q96AB3 205 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 ZNF503Q96F45 646 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 APCP25054 2843 aa20.28■□□□□ 0.84
SDCCAG3-201ENST00000298537 ZNF469Q96JG9 3925 aaPredicted RBP20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 MSMBP08118 114 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 ZNF674Q2M3X9 581 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 PATE2Q6UY27 113 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 RPUSD4Q96CM3 377 aaKnown RBP20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 MANBALQ9NQG1 85 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 FUT9Q9Y231 359 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 IGHV1-69DA0A0B4J2H0 117 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 C11orf94C9JXX5 98 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 I3L2K1 104 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 IGHV1-69P01742 117 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 FAM106CPP0CH98 169 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 GCHFRP30047 84 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 CST9LP1Q5W188 147 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 ZNF562Q6V9R5 426 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 ARPC1AQ92747 370 aa20.27■□□□□ 0.84
SDCCAG3-201ENST00000298537 IGHV7-81A0A0B4J1V7 117 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 A0A0U1RQK1 487 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 CXorf1O96002 111 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 ATF4P18848 351 aaPredicted RBP20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 TMEM219Q86XT9 240 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 C7orf69Q9H7B7 122 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 YTHDF2Q9Y5A9 579 aaKnown RBP20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 EGR2P11161 476 aaPredicted RBP20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 PAX1P15863 534 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 TNFRSF19Q9NS68 423 aa20.26■□□□□ 0.83
SDCCAG3-201ENST00000298537 HIF1ANQ9NWT6 349 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms