RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 FOXH1O75593 365 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 APOBEC3AP31941 199 aaPredicted RBP14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 CX3CL1P78423 397 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 PRR20EP86478 221 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 PRR20CP86479 221 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 PRR20DP86480 221 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 PRR20BP86481 221 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 PRR20AP86496 221 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 SSX8Q7RTT4 187 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 OR4S2Q8NH73 311 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 GNB4Q9HAV0 340 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 TMEM167BQ9NRX6 74 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 CCL3L1P16619 93 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 RBM14Q96PK6 669 aaKnown RBP14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 FBXL7Q9UJT9 491 aa14.88□□□□□ -0.03
PDLIM3-201ENST00000284767 HELTA6NFD8 242 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 VSTM5A8MXK1 200 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 RELQ04864 619 aaPredicted RBP14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 CENPWQ5EE01 88 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 DDB2Q92466 427 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 PRORYQ9H606 182 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 OSTCQ9NRP0 149 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 NAT8BQ9UHF3 227 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 SLC45A2Q9UMX9 530 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 FOXA2Q9Y261 457 aaPredicted RBP14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 SAA2P0DJI9 122 aaPredicted RBP14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 OR5I1Q13606 314 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 FBXL19-AS1Q494R0 122 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 ENY2Q9NPA8 101 aa14.87□□□□□ -0.03
PDLIM3-201ENST00000284767 OR5G3P0C626 314 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 FRMD6-AS1P0C7T7 363 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 HSPE1P61604 102 aaKnown RBP14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 LYG1Q8N1E2 194 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 KCNS1Q96KK3 526 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 CTSZQ9UBR2 303 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 NKX6-3A6NJ46 265 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 DIRC3C9JPN6 131 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 NPSP0C0P6 89 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 CYB5R2Q6BCY4 276 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 Q8N976 141 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 H1FXQ92522 213 aaKnown RBP14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 TMEM14BQ9NUH8 114 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
PDLIM3-201ENST00000284767 KRTDAPP60985 99 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 COL5A1-AS1Q5SY13 56 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 TMEM136Q6ZRR5 245 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 MIR17HGQ75NE6 70 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 MUC15Q8N387 334 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 IDI2-AS1Q9NZ38 188 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 TBL2Q9Y4P3 447 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 ITGB1BP1O14713 200 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 CA2P00918 260 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 LINC00869P0C866 280 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 IGFBP2P18065 325 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 PSG5Q15238 335 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 TIGITQ495A1 244 aa14.85□□□□□ -0.03
PDLIM3-201ENST00000284767 REG1AP05451 166 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 SFTPCP11686 197 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 CTRLP40313 264 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 RAB7AP51149 207 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 PQLC2Q6ZP29 291 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 ZNF439Q8NDP4 499 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 FAM103A1Q9BTL3 118 aaKnown RBP14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 NCOR1P1Q9H4R4 102 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 NRN1Q9NPD7 142 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 B9A039 149 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 ISLRO14498 428 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 ZNF253O75346 499 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 LY6HO94772 140 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 CRYBB3P26998 211 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 TECRQ9NZ01 308 aaKnown RBP14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 RNF114Q9Y508 228 aa14.84□□□□□ -0.03
PDLIM3-201ENST00000284767 IGHV1-69-2A0A0G2JMI3 117 aa14.83□□□□□ -0.03
PDLIM3-201ENST00000284767 AMTP48728 403 aa14.83□□□□□ -0.03
PDLIM3-201ENST00000284767 SUMO1P63165 101 aaKnown RBP14.83□□□□□ -0.03
PDLIM3-201ENST00000284767 OR4A47Q6IF82 309 aa14.83□□□□□ -0.03
PDLIM3-201ENST00000284767 SLC35E1Q96K37 410 aa14.83□□□□□ -0.03
PDLIM3-201ENST00000284767 hADV38S2A0JD32 116 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 HLA-DQA1P01909 254 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 AMY1AP04745 511 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 COL8A2P25067 703 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 BATFQ16520 125 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 RTL8BQ17RB0 113 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 TMEM200BQ69YZ2 307 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 NABP2Q9BQ15 211 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 CFAP46Q8IYW2 2715 aa14.83□□□□□ -0.04
PDLIM3-201ENST00000284767 A0A1W2PS18 150 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 TNFRSF13BO14836 293 aaPredicted RBP14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 UQCRFS1P47985 274 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 MRPS11P82912 194 aaKnown RBP14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 RNASE7Q9H1E1 156 aaKnown RBP14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 RPUSD1Q9UJJ7 312 aaKnown RBP14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 LINC00312Q9Y6C7 94 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 ACTL6BO94805 426 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 LOXP28300 417 aaPredicted RBP14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 SPATA45Q537H7 98 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 C19orf24Q9BVV8 132 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 UQCR10Q9UDW1 63 aa14.82□□□□□ -0.04
PDLIM3-201ENST00000284767 ASH1LQ9NR48 2969 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms