RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 NRN1LQ496H8 165 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 DOCK4Q8N1I0 1966 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 SAMD5Q5TGI4 173 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 CLEC2AQ6UVW9 174 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 UBE2L6O14933 153 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 RAB9AP51151 201 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 FAM106AQ4KMX7 169 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 Q9H3A6 140 aa13.76□□□□□ -0.21
SH3RF1-201ENST00000284637 TSPAN13O95857 204 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 RFNGQ9Y644 331 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 A0A0G2JLM5 398 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 FAM159AQ6UWV7 190 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 SBF2Q86WG5 1849 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 IGHV2OR16-5A0A0B4J2B6 119 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 IGKV1-12A0A0C4DH73 117 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 IGKV1D-12P01611 117 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 NCOR1O75376 2440 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 FMC1Q96HJ9 113 aa13.75□□□□□ -0.21
SH3RF1-201ENST00000284637 IGKV3OR2-268A0A0C4DH90 116 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 CD5LO43866 347 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 SAA1P0DJI8 122 aaPredicted RBP13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 IGHV1-2P23083 117 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 GEMIN7Q9H840 131 aaKnown RBP13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 APOMO95445 188 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 PYYP10082 97 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 CIRBPQ14011 172 aaKnown RBP13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 FAM90A2PQ658T7 463 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 CHCHD1Q96BP2 118 aaKnown RBP13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 GP6Q9HCN6 339 aa13.74□□□□□ -0.21
SH3RF1-201ENST00000284637 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 ORMDL3Q8N138 153 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 OR9G4Q8NGQ1 327 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 GREB1Q4ZG55 1949 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 TDGF1P13385 188 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 RRN3P1Q2M238 152 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 MRPL14Q6P1L8 145 aaKnown RBP13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 FGFBP3Q8TAT2 258 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 LINC01560Q8TB33 94 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 TGFAP01135 160 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 CCL3L1P16619 93 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 GAGE13Q4V321 117 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 SCGB3A1Q96QR1 104 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 FAM181BA6NEQ2 426 aa13.73□□□□□ -0.21
SH3RF1-201ENST00000284637 A0A1B0GW15 77 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 TM4SF5O14894 197 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 ZNF497Q6ZNH5 498 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 IQCF6A8MYZ5 107 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 ATP5LO75964 103 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 ZNF479Q96JC4 524 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 FBXL7Q9UJT9 491 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 NYNRINQ9P2P1 1898 aaKnown RBP13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 CIARTQ8N365 385 aaPredicted RBP13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 C21orf62Q9NYP8 219 aa13.72□□□□□ -0.21
SH3RF1-201ENST00000284637 EFNB3Q15768 340 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 RTN4RL2Q86UN3 420 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 FER1L6-AS1Q8NA97 138 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 DPM3Q9P2X0 92 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 UPK2O00526 184 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 EFNA2O43921 213 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 TMEM50AO95807 157 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 OR9G9P0C7N8 305 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 PPP1R17O96001 155 aa13.71□□□□□ -0.21
SH3RF1-201ENST00000284637 C15orf61A6NNL5 157 aa13.71□□□□□ -0.22
SH3RF1-201ENST00000284637 NDUFA3O95167 84 aa13.71□□□□□ -0.22
SH3RF1-201ENST00000284637 SFTA2Q6UW10 78 aa13.71□□□□□ -0.22
SH3RF1-201ENST00000284637 WDR83OSQ9Y284 106 aa13.71□□□□□ -0.22
SH3RF1-201ENST00000284637 TAF1LQ8IZX4 1826 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 B9A039 149 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 E9PQ18 207 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 PFN1P07737 140 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 PRB4P10163 310 aaPredicted RBP13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 MORN2Q502X0 79 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 IGLV3-12A0A075B6K2 115 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 KLRB1Q12918 225 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 C9orf172C9J069 976 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 HGFACQ04756 655 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 ZFAND6Q6FIF0 208 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms