RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
TMEM47-201ENST00000275954 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
TMEM47-201ENST00000275954 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
TMEM47-201ENST00000275954 MUC22E2RYF6 1773 aaPredicted RBP11.82□□□□□ -0.52
TMEM47-201ENST00000275954 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 UPK2O00526 184 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 TIMP3P35625 211 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 SRP14P37108 136 aaKnown RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 MBD3L4A6NDZ8 208 aaPredicted RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 DPRXA6NFQ7 191 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 TNFSF13O75888 250 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 APCSP02743 223 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 HIST1H1EP10412 219 aaKnown RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 S100A4P26447 101 aaKnown RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 CD81P60033 236 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 NRGNQ92686 78 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 TXNDC17Q9BRA2 123 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 ORM1P02763 201 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 PYYP10082 97 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 PRR31Q5SQ13 230 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 HEPN1Q6WQI6 88 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 Q71RC1 249 aaPredicted RBP11.81□□□□□ -0.52
TMEM47-201ENST00000275954 C1RLQ9NZP8 487 aa11.81□□□□□ -0.52
TMEM47-201ENST00000275954 LIPFP07098 398 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 TCTAP57738 103 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 EFNB3Q15768 340 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 GGTLC1Q9BX51 225 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 PAX6P26367 422 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 CCKARP32238 428 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 PPOXP50336 477 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 LCN2P80188 198 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 FAM209BQ5JX69 171 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 RNASE7Q9H1E1 156 aaKnown RBP11.8□□□□□ -0.52
TMEM47-201ENST00000275954 LOC105371242A0A075B767 164 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 SRIP30626 198 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 HIST2H2BCQ6DN03 193 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 OCC1Q8TAD7 63 aa11.8□□□□□ -0.52
TMEM47-201ENST00000275954 ARHGAP32A7KAX9 2087 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 HNRNPA3P51991 378 aaKnown RBP11.79□□□□□ -0.52
TMEM47-201ENST00000275954 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 LINC00587B1AMM8 73 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 ERVK11-1P61568 191 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 IL4P05112 153 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 FOXA3P55318 350 aaPredicted RBP11.79□□□□□ -0.52
TMEM47-201ENST00000275954 CLEC2AQ6UVW9 174 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.79□□□□□ -0.52
TMEM47-201ENST00000275954 PGLYRP4Q96LB8 373 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 DUX5Q96PT3 197 aa11.79□□□□□ -0.52
TMEM47-201ENST00000275954 A0A087WWC5 75 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM47-201ENST00000275954 OR2J3O76001 311 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 NBEAP1P0C6P0 100 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 FAM215AQ9Y5M1 114 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 HOXA5P20719 270 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
TMEM47-201ENST00000275954 TMEM177Q53S58 311 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 C1QL4Q86Z23 238 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 SPRY4Q9C004 299 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 VENTXO95231 258 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
TMEM47-201ENST00000275954 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
TMEM47-201ENST00000275954 NDUFS7O75251 213 aa11.77□□□□□ -0.52
TMEM47-201ENST00000275954 ADIPOQQ15848 244 aa11.77□□□□□ -0.52
TMEM47-201ENST00000275954 CCDC144NLQ6NUI1 221 aa11.77□□□□□ -0.52
TMEM47-201ENST00000275954 SLC25A33Q9BSK2 321 aa11.77□□□□□ -0.52
TMEM47-201ENST00000275954 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 FOXH1O75593 365 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 FCER1GP30273 86 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 RELBQ01201 579 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 UNQ5815/PRO19632Q6UWF5 114 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 BPIFA4PQ86YQ2 179 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms