RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 BET1LQ9NYM9 111 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 A0A1B0GV90 55 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
NPC1-201ENST00000269228 PKIAP61925 76 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 H3BUX3 64 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 TCF21O43680 179 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 AGAP20933 346 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 CCKARP32238 428 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 HIST1H2BAQ96A08 127 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
NPC1-201ENST00000269228 MOB4Q9Y3A3 225 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 TMEM183BQ1AE95 376 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 SLC25A48Q6ZT89 311 aaKnown RBP11.29□□□□□ -0.6
NPC1-201ENST00000269228 NEU1Q99519 415 aa11.29□□□□□ -0.6
NPC1-201ENST00000269228 A6NNC1 897 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 MT-ND6P03923 174 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 PRSS8Q16651 343 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 MINOS1-NBL1R4GNA1 71 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 M0R1W7 72 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 GCGP01275 180 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
NPC1-201ENST00000269228 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
NPC1-201ENST00000269228 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 NPFFO15130 113 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
NPC1-201ENST00000269228 Q6ZR03 302 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 SLC25A16P16260 332 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 LINC00205P59089 165 aa11.28□□□□□ -0.6
NPC1-201ENST00000269228 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.6
NPC1-201ENST00000269228 TRGC2P03986 189 aa11.27□□□□□ -0.6
NPC1-201ENST00000269228 ATP5G3P48201 142 aa11.27□□□□□ -0.6
NPC1-201ENST00000269228 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.6
NPC1-201ENST00000269228 PEMTQ9UBM1 199 aa11.27□□□□□ -0.6
NPC1-201ENST00000269228 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.61
NPC1-201ENST00000269228 PIEZO1Q92508 2521 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 FAM90A9PA6NNJ1 464 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 BUB1B-PAK6H3BSN5 160 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 LINC00473A8K010 186 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 C9JCJ5 164 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 PEX7O00628 323 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 BTF3P20290 206 aaKnown RBP11.27□□□□□ -0.61
NPC1-201ENST00000269228 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.61
NPC1-201ENST00000269228 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 SHANK1Q9Y566 2161 aa11.27□□□□□ -0.61
NPC1-201ENST00000269228 TGIF2-C20orf24A0A0A6YYL0 155 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 TRAV3A0A0B4J244 114 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 SCO2A0A1W2PP80 73 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 TCRBV4S1A1TA0A5B7 111 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 OOSP1A8MZH6 123 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 PVRIGQ6DKI7 326 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 BIVMQ86UB2 503 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 SFRP2Q96HF1 295 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
NPC1-201ENST00000269228 RELBQ01201 579 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 J3QKU1 62 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 MYOD1P15172 320 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
NPC1-201ENST00000269228 H0YJW9 148 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 UQCRFS1P47985 274 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 HERVK_113P61574 105 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 Q9H3A6 140 aa11.26□□□□□ -0.61
NPC1-201ENST00000269228 A0A1W2PNU3 283 aaPredicted RBP11.25□□□□□ -0.61
NPC1-201ENST00000269228 GGCTO75223 188 aaKnown RBP11.25□□□□□ -0.61
NPC1-201ENST00000269228 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
NPC1-201ENST00000269228 LINC00587B1AMM8 73 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 ZNF56Q15929 161 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
NPC1-201ENST00000269228 LINC01356Q8N9X3 169 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms