RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 OR13A1Q8NGR1 328 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 COL4A1P02462 1669 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 LINC00158P58513 81 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 ACP7Q6ZNF0 438 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 CCL1P22362 96 aa11.62□□□□□ -0.55
TARDBP-201ENST00000240185 DDX60LQ5H9U9 1706 aaKnown RBP11.62□□□□□ -0.55
TARDBP-201ENST00000240185 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 TNFRSF14Q92956 283 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
TARDBP-201ENST00000240185 IFI6P09912 130 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
TARDBP-201ENST00000240185 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 CLEC19AQ6UXS0 136 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 MRPL20Q9BYC9 149 aaKnown RBP11.61□□□□□ -0.55
TARDBP-201ENST00000240185 CST9LQ9H4G1 147 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 LAMTOR3Q9UHA4 124 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 RREB1Q92766 1687 aa11.61□□□□□ -0.55
TARDBP-201ENST00000240185 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 J3QW42 95 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 PSG3Q16557 428 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 SCN1AP35498 2009 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 CACNA1IQ9P0X4 2223 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 EFNB3Q15768 340 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 KLF17Q5JT82 389 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-201ENST00000240185 TMEM54Q969K7 222 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 JPT2Q9H910 190 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 DPM3Q9P2X0 92 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 COL24A1Q17RW2 1714 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 EREGO14944 169 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 CD5LO43866 347 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 FHL5Q5TD97 284 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
TARDBP-201ENST00000240185 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
TARDBP-201ENST00000240185 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
TARDBP-201ENST00000240185 C4orf51C9J302 202 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 IGKV1D-33P01593 117 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 IGKV1-33P01594 117 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 LAGE3Q14657 143 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 PPP1R27Q86WC6 154 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 CTHRC1Q96CG8 243 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 NCOR1O75376 2440 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 ID3Q02535 119 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 KLF12Q9Y4X4 402 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 VWC2LB2RUY7 222 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 LINC01549A6NIU2 74 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
TARDBP-201ENST00000240185 F2Z2F3 143 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 HTN3P15516 51 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 CD33P20138 364 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-201ENST00000240185 ZNF703Q9H7S9 590 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-201ENST00000240185 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 TM4SF5O14894 197 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 NCR2O95944 276 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 ABHD17AQ96GS6 310 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 AHCTF1Q8WYP5 2266 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 PAX4O43316 350 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 SLC25A48Q6ZT89 311 aaKnown RBP11.58□□□□□ -0.56
TARDBP-201ENST00000240185 RNF125Q96EQ8 232 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 TRBV6-7A0A0A0MS04 114 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 PATE3B3GLJ2 98 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 D6R8Y8 96 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
TARDBP-201ENST00000240185 PRR31Q5SQ13 230 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 FAM216BQ8N7L0 139 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 WDR83OSQ9Y284 106 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 THSD7AQ9UPZ6 1657 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 C9JAW5 83 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 UPK2O00526 184 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 TCRBV4S1A1TA0A5B7 111 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 LINC01551Q86U37 167 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 ITGB1BP1O14713 200 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-201ENST00000240185 ATG2BQ96BY7 2078 aa11.57□□□□□ -0.56
TARDBP-201ENST00000240185 C15orf61A6NNL5 157 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 PF4P02776 101 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 PVRIGQ6DKI7 326 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 IGKV1D-43A0A0B4J1Z2 117 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 SPAARA0A1B0GVQ0 90 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 A0A1W2PQF6 199 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 FAM201AQ5SY85 155 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 EFEMP2O95967 443 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 FXYD7P58549 80 aa11.56□□□□□ -0.56
TARDBP-201ENST00000240185 TFF2Q03403 129 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms