RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 TRAV9-2A0A087WT02 112 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 DEFB108AA8MXU0 73 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 TCF21O43680 179 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 IGKV3-15P01624 115 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 TSPOP30536 169 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 LINC00205P59089 165 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 CD177Q8N6Q3 437 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 ZNF738Q8NE65 137 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 RFESDQ8TAC1 157 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 FAM57AQ8TBR7 257 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 RCHY1Q96PM5 261 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 SAP30LQ9HAJ7 183 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 PLEKHA3Q9HB20 300 aa13.02□□□□□ -0.32
SF3A2-201ENST00000221494 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 NKX6-3A6NJ46 265 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 IGFBP2P18065 325 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 TFPI2P48307 235 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 RPS20P60866 119 aaKnown RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 MBNL2Q5VZF2 373 aaKnown RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 ATP5L2Q7Z4Y8 100 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 C18orf32Q8TCD1 76 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 MBD6Q96DN6 1003 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 SMIM12Q96EX1 92 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 COX11Q9Y6N1 276 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 DSPP15924 2871 aaKnown RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 TRAV3A0A0B4J244 114 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 TIMM8AO60220 97 aaPredicted RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 FRMD6-AS1P0C7T7 363 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 UBE2V1Q13404 147 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 OR4A47Q6IF82 309 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 DOLPP1Q86YN1 238 aa13.01□□□□□ -0.33
SF3A2-201ENST00000221494 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 RNASE7Q9H1E1 156 aaKnown RBP13.01□□□□□ -0.33
SF3A2-201ENST00000221494 SRRM5B3KS81 715 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 C22orf46C9J442 243 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 C8orf88P0DMB2 117 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 PTTG1IPP53801 180 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 PRCDQ00LT1 54 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 C2orf83Q53S99 150 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 OR8B3Q8NGG8 313 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 ZNF503Q96F45 646 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 OR8B2Q96RD0 313 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
SF3A2-201ENST00000221494 GGTLC3B5MD39 225 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 LYZL6O75951 148 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 LRRC29Q8WV35 223 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 IDI2-AS1Q9NZ38 188 aa13□□□□□ -0.33
SF3A2-201ENST00000221494 PPBPP02775 128 aa12.99□□□□□ -0.33
SF3A2-201ENST00000221494 PRR30Q53SZ7 412 aaPredicted RBP12.99□□□□□ -0.33
SF3A2-201ENST00000221494 RPL39P5Q59GN2 51 aa12.99□□□□□ -0.33
SF3A2-201ENST00000221494 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
SF3A2-201ENST00000221494 CXorf67Q86X51 503 aaPredicted RBP12.99□□□□□ -0.33
SF3A2-201ENST00000221494 TPRX1Q8N7U7 411 aa12.99□□□□□ -0.33
SF3A2-201ENST00000221494 CACNG8Q8WXS5 425 aa12.99□□□□□ -0.33
SF3A2-201ENST00000221494 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
SF3A2-201ENST00000221494 H0YJW9 148 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 OR7C2O60412 319 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 HSBP1O75506 76 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CGB3P0DN86 165 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CGB7P0DN87 165 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 EDDM3AQ14507 147 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 VHLLQ6RSH7 139 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 PRSS57Q6UWY2 283 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 SLC25A33Q9BSK2 321 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 PROCRQ9UNN8 238 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 OR51B2Q9Y5P1 312 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 SVILO95425 2214 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 FAM181BA6NEQ2 426 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CEACAM8P31997 349 aaPredicted RBP12.98□□□□□ -0.33
SF3A2-201ENST00000221494 REG1BP48304 166 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 KIAA1644Q3SXP7 199 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CLEC7AQ9BXN2 247 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CALYQ9NYX4 217 aa12.98□□□□□ -0.33
SF3A2-201ENST00000221494 SOX21Q9Y651 276 aaPredicted RBP12.98□□□□□ -0.33
SF3A2-201ENST00000221494 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 DOCK7Q96N67 2140 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 IGHV2OR16-5A0A0B4J2B6 119 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 IGHV3-64DA0A0J9YX35 117 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 IGLC7A0M8Q6 106 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 INS-IGF2F8WCM5 200 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 UBE2G1P62253 170 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 FXYD3Q14802 87 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 MUC15Q8N387 334 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 DCTN5Q9BTE1 182 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 ZNF835Q9Y2P0 537 aa12.97□□□□□ -0.33
SF3A2-201ENST00000221494 UPK2O00526 184 aa12.96□□□□□ -0.33
SF3A2-201ENST00000221494 CCL25O15444 150 aa12.96□□□□□ -0.33
SF3A2-201ENST00000221494 ACTL6BO94805 426 aa12.96□□□□□ -0.33
SF3A2-201ENST00000221494 GFRALQ6UXV0 394 aa12.96□□□□□ -0.33
SF3A2-201ENST00000221494 FAM169BQ8N8A8 192 aa12.96□□□□□ -0.33
SF3A2-201ENST00000221494 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms