RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ndufb11O09111 151 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Cd96Q3U0X8 602 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 AdipoqQ60994 247 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr688Q6W049 321 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1396Q7TQS8 315 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Wdyhv1Q80WB5 209 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Lyrm2Q8R033 88 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Vmn1r230Q8R2A2 316 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Nup35Q8R4R6 325 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Sec11cQ9D8V7 192 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Vmn1r44Q9EQ47 310 aa13.28□□□□□ -0.28
Trim39-203ENSMUST00000113706 Fthl17bA2AHC5 176 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Fthl17cA2AHC6 176 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 1700015F17RikD3YUK8 150 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Pwwp2bE9Q9M8 600 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Lbx1P52955 282 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Rps23P62267 143 aaKnown RBP13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Fthl17fQ3SXD2 176 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm5615Q3UW02 101 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Olfr1170Q8VFG1 316 aa13.27□□□□□ -0.28
Trim39-203ENSMUST00000113706 Gm36368A0A1D5RLK8 91 aa13.27□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm8265K7N6Y8 158 aa13.27□□□□□ -0.29
Trim39-203ENSMUST00000113706 Slc25a41Q8BVN7 312 aa13.27□□□□□ -0.29
Trim39-203ENSMUST00000113706 StradbQ8K4T3 418 aa13.27□□□□□ -0.29
Trim39-203ENSMUST00000113706 Scrt1Q99M85 348 aa13.27□□□□□ -0.29
Trim39-203ENSMUST00000113706 Kmt2bO08550 2713 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr204E9Q8M0 305 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm6460F6YJZ8 199 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 KcnrgQ2TUM3 264 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Tgoln1Q62313 353 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Q8BN57 294 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Commd5Q8R395 224 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr512Q8VFZ4 326 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 GferP56213 198 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Prdx2Q61171 198 aaKnown RBP13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 1810024B03RikQ8BWE1 200 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 9130008F23RikQ9D2Z6 181 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Slc25a10Q9QZD8 287 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Ighv14-4A0A0A6YVR1 117 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 CrpP14847 225 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 RbpjP31266 526 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr1137Q7TR40 310 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Nmes1Q810Q5 83 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Cbln2Q8BGU2 224 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Smim4Q8C1Q6 80 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Obp2aQ8K1H9 176 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr523Q8VFE7 317 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 FrkQ922K9 512 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Sft2d3Q9CSV6 209 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Sapcd1Q9CY86 146 aa13.26□□□□□ -0.29
Trim39-203ENSMUST00000113706 Tcrg-C4A0A075B6C7 190 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Lnp1A0A1B0GSK3 178 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Nkx6-2D3Z4R4 277 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Adamts17E9Q4D1 1122 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Pitx3O35160 302 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Kcns2O35174 477 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Iglc3P01845 104 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Pax1P09084 446 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Wnt5bP22726 359 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm10840Q3V2K9 103 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Prss35Q8C0F9 409 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr794Q8VF26 320 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Rbms1Q91W59 403 aaKnown RBP13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Bbc3Q99ML1 193 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Rgs11Q9Z2H1 443 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Trav15-2-dv6-2A0A075B650 123 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm6526G3X9Q9 198 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Ifna2P01573 190 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Clec3bP43025 202 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm10645Q3UPY1 145 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr822Q8VFU1 312 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Abhd14aQ922Q6 247 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Dctn5Q9QZB9 182 aa13.25□□□□□ -0.29
Trim39-203ENSMUST00000113706 Trav6d-5A0A075B6B9 112 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm21095A0A087WR14 222 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm20824A0A087WS97 222 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr1328B1ARV2 313 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Ly6c1P0CW02 131 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Kcnj3P63250 501 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Npas1P97459 594 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Loxl1P97873 607 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm813Q3UWK9 176 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Slc25a35Q5SWT3 300 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Psg17Q62056 475 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Cd200r1lQ6XJV6 249 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 PhyhiplQ8BGT8 375 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Mbnl2Q8C181 373 aaKnown RBP13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr156Q8VGA9 318 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Aurkaip1Q9DCJ7 200 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gm14443A2ARX0 610 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Ca2P00920 260 aaKnown RBP13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Hbb-yP02104 147 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Gabra2P26048 451 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Mas1P30554 324 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 CortP56469 109 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr1341Q7TQV4 312 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Commd1Q8K4M5 188 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Sh2d2aQ9QXK9 374 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr588-ps1A0A1B0GSZ2 313 aa13.24□□□□□ -0.29
Trim39-203ENSMUST00000113706 Olfr918E9PVZ7 325 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms