RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm15107B1B0X0 449 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Gm4884E9PVP9 694 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Gm15097E9QA14 449 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Gm21746J3QMM6 180 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Lin7cO88952 197 aaKnown RBP18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 P01630 113 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Tnfrsf1aP25118 454 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 LtbP41155 306 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Ccl7Q03366 97 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Lyplal1Q3UFF7 239 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 NotoQ5TIS6 240 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Gm15085Q62012 449 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Thoc7Q7TMY4 204 aaKnown RBP18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr1031Q7TR87 336 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 LaynQ8C351 381 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Sdhaf2Q8C6I2 164 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr1141Q8VFQ7 311 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Fbxo36Q9CQ24 188 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Mrpl28Q9D1B9 257 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Lysmd2Q9D7V2 215 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 KrasP32883 189 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 VhlP40338 181 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 AesP63002 197 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Q3U595 105 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Npy6rQ61212 371 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Rnf170Q8CBG9 286 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Fam169bQ8CHT6 337 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Sval1Q9D2X6 151 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Golt1aQ9DCQ3 133 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Slc25a10Q9QZD8 287 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Sumo3Q9Z172 110 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Tsc22d3Q9Z2S7 137 aa18.85■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr102B2RT33 308 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Hbb-yP02104 147 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Ly6c1P0CW02 131 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Gabra2P26048 451 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Loxl1P97873 607 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Znf575Q3TXZ1 239 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 HykkQ5U5V2 376 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Dio1Q61153 257 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr1396Q7TQS8 315 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Ankrd34cQ8BLB8 534 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 TprkbQ8QZZ7 175 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Nfam1Q8R4V1 264 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr101Q920Z0 308 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr661Q99NH4 319 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Magt1Q9CQY5 335 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Sh2d2aQ9QXK9 374 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Myo9bQ9QY06 2114 aa18.84■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Unc79Q0KK59 2596 aa18.83■□□□□ 0.61
Scn1b-201ENSMUST00000098548 Olfr1490A0A1L1SVH0 321 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 A0A1Y7VLU2 103 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 P01783 136 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Hsf1P38532 525 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gpr55Q3UJF0 327 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 DbpQ60925 325 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rbm38Q62176 237 aaKnown RBP18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 St8sia3Q64689 380 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Zc4h2Q68FG0 224 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ceacam9Q78T27 234 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Mob3cQ8BJG4 216 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 C1qtnf4Q8R066 326 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lamtor1Q9CQ22 161 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lelp1Q9DAE3 120 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ly96Q9JHF9 160 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rcl1Q9JJT0 373 aaKnown RBP18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 St6galnac6Q9JM95 333 aa18.83■□□□□ 0.6
Scn1b-201ENSMUST00000098548 KantrA0A1W2P7I0 76 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr248E9Q1L6 309 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ascl5M0QWB7 188 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Kcns2O35174 477 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Tmem71Q149F5 287 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Scarb1Q61009 509 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Foxb2Q64733 428 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 CenpxQ8C4X1 78 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Fhl4Q8CDC8 279 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 WrbQ8K0D7 174 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rbpms2Q8VC52 206 aaKnown RBP18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr1151Q8VFQ8 308 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rnf151Q9CQ29 239 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rnf115Q9D0C1 305 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 BambiQ9D0L6 260 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Prss30Q9QYZ9 310 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Klk4Q9Z0M1 255 aa18.82■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Tcrg-C4A0A075B6C7 190 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 CideaO70302 217 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Tcf7Q00417 419 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Nr2c2apQ3TV70 140 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gpr137Q80ZU9 396 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Prodh2Q8VCZ9 456 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr266Q8VFC3 316 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 FlncQ8VHX6 2726 aaKnown RBP18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lrrc3cA0A1B0GRI5 255 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr635K7N6B1 321 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gsx2P31316 305 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 CamlgP49070 294 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 SlbpP97440 275 aaKnown RBP18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rasl2-9Q61820 216 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Slc35e1Q8CD26 409 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr770Q8VGC2 311 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms