RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm45861A0A1B0GRY3 1923 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Vma21-psA0A140T8R2 101 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm20830J3KML6 227 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cst7O89098 144 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Hist1h1eP43274 219 aaKnown RBP8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Prdx2Q61171 198 aaKnown RBP8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm10334Q792Y8 246 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1102Q8VES2 324 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 FibinQ9CQS3 217 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fxyd4Q9D2W0 88 aa8.9□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ank3G5E8K5 1961 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Nup210lQ9D2F7 1881 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ighv5-12A0A075B5Q4 117 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm21778A0A087WNP8 232 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fndc7A2AED3 737 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Efnb1P52795 345 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 FusP56959 518 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Apobec4Q497M3 374 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr43Q7TRX1 313 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr403Q7TRX2 313 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1271Q8VG62 305 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 ClcP97400 68 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 SepsecsQ6P6M7 504 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Slc16a13Q8CE94 428 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Slc36a4Q8CH36 500 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Klre1Q8CJC7 226 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Obp2aQ8K1H9 176 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Prodh2Q8VCZ9 456 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 B3gnt9Q8VI16 399 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Vgll1Q99NC0 307 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Necap1Q9CR95 275 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rab1bQ9D1G1 201 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm10778A0A087WNP5 499 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 TfpiO54819 306 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cldn1O88551 211 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Sumo1P63166 101 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Mrgprb2Q3KNA1 338 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tmem184aQ3UFJ6 425 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 A3galt2Q3V1N9 370 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Trav8d-1Q5R1H8 112 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Prss45Q8K4I7 317 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ssmem1Q9D9Y8 244 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Unc119Q9Z2R6 240 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ascc3E9PZJ8 2198 aaKnown RBP8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Malrd1A2AJX4 2123 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr685A0A1L1SVG7 331 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Vmn1r181Q0P547 304 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Foxr2Q3UM89 302 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ceacam10Q61400 265 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gpank1Q61858 372 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tle1Q62440 770 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfp729bQ80VN4 1045 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ankrd34cQ8BLB8 534 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Lrfn3Q8BLY3 626 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Q8CDS7 251 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Slc6a8Q8VBW1 640 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr124Q8VGW6 315 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fbxo25Q9D2Y6 357 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 ManbalQ9D8X0 85 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 1700008P02RikQ9DAJ8 175 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rarres2Q9DD06 162 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Chst1Q9EQC0 411 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tmem9bQ9JJR8 199 aa8.89□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ankrd12G5E893 2041 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Trbv12-1A0A0B4J1H0 124 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 P01638 115 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1537P34983 314 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 AesP63002 197 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pax6P63015 422 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Q24JP4 165 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 C130073F10RikQ8C4L8 201 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Suclg1Q9WUM5 346 aaKnown RBP8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 DeddQ9Z1L3 318 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Myo16Q5DU14 1919 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Trav12-1A0N8R1 115 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Onecut1O08755 465 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 P01806 116 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Hoxa1P09022 331 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 PtcraP0C6B2 199 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cxcl2P10889 100 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Dmrta1Q8CFG4 490 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Adam6aB2RSY5 754 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Hist1h3aP68433 136 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 H2-T22Q31615 379 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 BC147527Q3V185 167 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 9130008F23RikQ9D2Z6 181 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Q9D7E4 109 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cldn34c4A2ANA3 212 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1053L7MU59 313 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Slc25a5P51881 298 aaKnown RBP8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pla2g5P97391 137 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Psg19Q4KL31 475 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1342Q8VFY3 315 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Hdhd3Q9CYW4 251 aa8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cyb5r3Q9DCN2 301 aaKnown RBP8.88□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tcrg-V5A0A0G2JGV5 113 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gfra3O35118 397 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Q149G0 166 aaKnown RBP8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fam53bQ8BGR5 422 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 SmagpQ99KC7 97 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 105.6 ms