RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Rpp21Q8R040 150 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ifi27l2bQ8VC49 283 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ucn3Q924A4 164 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ms4a4cQ9D3F6 226 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Syngr4Q9Z1L2 233 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 DeddQ9Z1L3 318 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 CenpfE9Q3P4 2997 aaKnown RBP9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ncor1Q60974 2453 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm15440D3Z3P4 90 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr250E9PV37 331 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Guca2aP33680 116 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cln5Q3UMW8 341 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Znf664Q4VA44 261 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm13757Q7TR17 305 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr987Q7TRA2 309 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 9430097D07RikQ8BS47 195 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 BmperQ8CJ69 685 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Pcgf1Q8R023 259 aaKnown RBP9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Prr12E9PYL2 2035 aaKnown RBP9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 D830044I16RikA0A1D5RM53 117 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Trav12-1A0N8R1 115 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp972A2AW65 139 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cxcl1P12850 96 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ccl7Q03366 97 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 BC147527Q3V185 167 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Npy6rQ61212 371 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp975Q6NVD6 525 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1384Q8VFA8 318 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Epdr1Q99M71 224 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Flywch2Q9CQE9 139 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Efemp2Q9WVJ9 443 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Szt2A2A9C3 3431 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Igh-VJ558P01758 117 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ptbp1P17225 527 aaKnown RBP9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 H2-T22Q31615 379 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Rab31Q921E2 194 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Vsig2Q9Z109 328 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Col4a6B1AVK5 1691 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1496B9EHG2 317 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ppp1cbP62141 327 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm10447Q3UQ92 135 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Poc1aQ8JZX3 405 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Znhit1Q8R331 154 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1102Q8VES2 324 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr101Q920Z0 308 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ahctf1Q8CJF7 2243 aaKnown RBP9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 A0A1Y7VIT9 351 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm43517E9PYS1 339 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ifna5P07349 189 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Mesp1P97309 243 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Bcl2l15Q08ED0 167 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dll1Q61483 722 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp87Q8K2A4 540 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cd226Q8K4F0 333 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ctag2Q9D9S4 219 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nudt3Q9JI46 168 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Vstm2bQ9JME9 285 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm21616B6ZB74 166 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ankrd65F6YK91 380 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 P04945 108 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Prss2P07146 246 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp27P10077 819 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 RelP15307 587 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 EnsaP60840 121 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ctxn2Q3URE8 81 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cd200r1lQ6XJV6 249 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fbxw26Q8BI58 466 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Srrm4Q8BKA3 608 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 B4galt7Q8R087 327 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 MmachcQ9CZD0 279 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dtwd2Q9D0U1 298 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Mdp1Q9D967 164 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fzr1Q9R1K5 493 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Defb3Q9WTL0 63 aa9.73□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr15P23275 312 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 CenptQ3TJM4 515 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Neil3Q8K203 606 aaKnown RBP9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr715Q8VG49 315 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem100Q9CQG9 134 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Mad2l1bpQ9DCX1 276 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 TectbO08524 329 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Wdr1O88342 606 aaKnown RBP9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 P01803 113 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nhlh2Q64221 135 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 2210407C18RikQ6YI28 220 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ndufv3Q8BK30 104 aaKnown RBP9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 C130073F10RikQ8C4L8 201 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem170aQ9D342 144 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Reg4Q9D8G5 157 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1016A2ASV2 309 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 H2-M5A7VMS3 348 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm20877J3QPZ4 227 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm20767O70517 169 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 PcolceQ61398 468 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ceacam9Q78T27 234 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm10334Q792Y8 246 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dtx2Q8R3P2 619 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem19Q91W52 336 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem50aQ9CXL1 157 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Spaca3Q9D9X8 221 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms