RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TNXAQ16473 311 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-216ENST00000641375 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 TEPPQ6URK8 271 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 PERPQ96FX8 193 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
PHGDH-216ENST00000641375 TBX15Q96SF7 602 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 SSX3Q99909 188 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 LPAR2Q9HBW0 351 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 RD3LP0DJH9 198 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
PHGDH-216ENST00000641375 COMPP49747 757 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-216ENST00000641375 WT1-ASQ06250 92 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 RAB31Q13636 194 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 ACSM6Q6P461 480 aa13.18□□□□□ -0.3
PHGDH-216ENST00000641375 LSM4Q9Y4Z0 139 aaKnown RBP13.18□□□□□ -0.3
PHGDH-216ENST00000641375 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 HOXA5P20719 270 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OPRK1P41145 380 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 PLGLAQ15195 96 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 MMDQ15546 238 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-216ENST00000641375 PYY3Q5JQD4 70 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 RPP25LQ8N5L8 163 aaKnown RBP13.17□□□□□ -0.3
PHGDH-216ENST00000641375 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OR13C7P0DN81 318 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 OR2T10Q8NGZ9 312 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 RNASEH2CQ8TDP1 164 aaKnown RBP13.17□□□□□ -0.3
PHGDH-216ENST00000641375 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
PHGDH-216ENST00000641375 SPG11Q96JI7 2443 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 NBR2O15453 112 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 SNRNP70P08621 437 aaKnown RBP13.16□□□□□ -0.3
PHGDH-216ENST00000641375 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
PHGDH-216ENST00000641375 CCL20P78556 96 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 NPBQ8NG41 125 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 MGST2Q99735 147 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
PHGDH-216ENST00000641375 IGHV4-30-2A0A087WSY4 118 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 CYB5BO43169 146 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 CDX1P47902 265 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-216ENST00000641375 CD69Q07108 199 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 HES1Q14469 280 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 ZNF787Q6DD87 383 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 TMEM144Q7Z5S9 345 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 EAF1Q96JC9 268 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-216ENST00000641375 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-216ENST00000641375 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 MAP1LC3B2A6NCE7 125 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 NDUFA3O95167 84 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 PAX8Q06710 450 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 LCN15Q6UWW0 184 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 MAP1LC3BQ9GZQ8 125 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 RPS10P5Q9NQ39 176 aa13.15□□□□□ -0.3
PHGDH-216ENST00000641375 IGLC7A0M8Q6 106 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 S100A2P29034 98 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 GNB1P62873 340 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 NRGNQ92686 78 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 P2RX4Q99571 388 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 PKIAP61925 76 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 EBI3Q14213 229 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 SSX7Q7RTT5 188 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 DYNAPQ8N1N2 210 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 C1orf159Q96HA4 380 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
PHGDH-216ENST00000641375 PXMP4Q9Y6I8 212 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
PHGDH-216ENST00000641375 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-216ENST00000641375 C9JQL5 133 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 DDTP30046 118 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 RPL29P47914 159 aaKnown RBP13.13□□□□□ -0.31
PHGDH-216ENST00000641375 GAMTQ14353 236 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SRSF12Q8WXF0 261 aaKnown RBP13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SLC35E1Q96K37 410 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SLC25A16P16260 332 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SAA4P35542 130 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 PMS2P11Q13670 270 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 RARRES2Q99969 163 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 SLC25A22Q9H936 323 aa13.13□□□□□ -0.31
PHGDH-216ENST00000641375 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms