RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 RTL8BQ17RB0 113 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 HES3Q5TGS1 186 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 STUMQ69YW2 141 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 ATOH7Q8N100 152 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 GCM1Q9NP62 436 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 SERTAD4Q9NUC0 356 aa11.19□□□□□ -0.62
PAX6-280ENST00000640872 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 CECR9P0C854 216 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 CGB3P0DN86 165 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 CGB7P0DN87 165 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 TAS2R45P59539 299 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 PMCHL1Q16048 86 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 PPP1R35Q8TAP8 253 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 FAM168AQ92567 244 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
PAX6-280ENST00000640872 TUBG2Q9NRH3 451 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 IGHV2-26A0A0B4J1V2 119 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 TOMM40O96008 361 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 CD46P15529 392 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
PAX6-280ENST00000640872 MBNL2Q5VZF2 373 aaKnown RBP11.18□□□□□ -0.62
PAX6-280ENST00000640872 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.18□□□□□ -0.62
PAX6-280ENST00000640872 TNXAQ16473 311 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 TMEM164Q5U3C3 297 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 PRNDQ9UKY0 176 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 IGHV3OR15-7A0A075B7D8 119 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 J3QR06 171 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 C8orf88P0DMB2 117 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
PAX6-280ENST00000640872 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
PAX6-280ENST00000640872 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 TBR1Q16650 682 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 NHLRC2Q8NBF2 726 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 OR5B3Q8NH48 314 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 SSBP3Q9BWW4 388 aaPredicted RBP11.17□□□□□ -0.62
PAX6-280ENST00000640872 ZNF257Q9Y2Q1 563 aa11.17□□□□□ -0.62
PAX6-280ENST00000640872 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 NKX6-3A6NJ46 265 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 PRR33A8MZF0 331 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 HOXC12P31275 282 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 PTTG1IPP53801 180 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
PAX6-280ENST00000640872 ASPHD1Q5U4P2 390 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 FAM231DQ6ZW35 169 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 OR2Z1Q8NG97 314 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 LOXL4Q96JB6 756 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 DCHS1Q96JQ0 3298 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 ATMQ13315 3056 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 MZT1Q08AG7 82 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 UNQ5815/PRO19632Q6UWF5 114 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 Q6ZVH6 145 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
PAX6-280ENST00000640872 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
PAX6-280ENST00000640872 H0YJW9 148 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 UPK2O00526 184 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 IGLV1-44P01699 117 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 CFHR2P36980 270 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 RBX1P62877 108 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 UBE2V1Q13404 147 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 MORN5Q5VZ52 161 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 C1orf162Q8NEQ5 155 aaPredicted RBP11.15□□□□□ -0.62
PAX6-280ENST00000640872 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 ADTRPQ96IZ2 230 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 LINC00479Q96M42 142 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
PAX6-280ENST00000640872 BET1LQ9NYM9 111 aa11.15□□□□□ -0.62
PAX6-280ENST00000640872 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
PAX6-280ENST00000640872 IGHV2OR16-5A0A0B4J2B6 119 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 HSBP1O75506 76 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 SRSF6Q13247 344 aaKnown RBP11.14□□□□□ -0.63
PAX6-280ENST00000640872 MLANAQ16655 118 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 NUP35Q8NFH5 326 aa11.14□□□□□ -0.63
PAX6-280ENST00000640872 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms