RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 CSN3P07498 182 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 SPCS3P61009 180 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
LINC00339-209ENST00000635450 IL34Q6ZMJ4 242 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 Q6ZRM9 215 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 CENPSQ8N2Z9 138 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 OR52E5Q8NH55 327 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 SCARB1Q8WTV0 552 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 ATP6V0BQ99437 205 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 SDHCQ99643 169 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-209ENST00000635450 C7orf50Q9BRJ6 194 aaKnown RBP11.83□□□□□ -0.52
LINC00339-209ENST00000635450 ZC4H2Q9NQZ6 224 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
LINC00339-209ENST00000635450 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 SIGLEC8Q9NYZ4 499 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
LINC00339-209ENST00000635450 A0A0B4J2A0 478 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 LGALS9O00182 355 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 SULT1A3P0DMM9 295 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 SULT1A4P0DMN0 295 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 IL7P13232 177 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 VAMP1P23763 118 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 CCR6P51684 374 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 Q56UQ5 140 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 LINC00299Q6ZSB3 139 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
LINC00339-209ENST00000635450 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
LINC00339-209ENST00000635450 SHPKQ9UHJ6 478 aa11.82□□□□□ -0.52
LINC00339-209ENST00000635450 DUXBA0A1W2PPF3 345 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 A6NHS1 94 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 K7EIM0 57 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 MFAP4P55083 255 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 CNPY1Q3B7I2 92 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 Q8N1Y9 231 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 DYNLRB2Q8TF09 96 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
LINC00339-209ENST00000635450 CORTO00230 105 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 MT-CO2P00403 227 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
LINC00339-209ENST00000635450 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 LCN12Q6JVE5 192 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 LYZL2Q7Z4W2 148 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 S100ZQ8WXG8 99 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
LINC00339-209ENST00000635450 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-209ENST00000635450 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 IZUMO1RA6ND01 250 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 I3L2K1 104 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 NDUFB6O95139 128 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 SFT2D2O95562 160 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 RNASE2P10153 161 aaKnown RBP11.79□□□□□ -0.52
LINC00339-209ENST00000635450 EDN2P20800 178 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 PPP1R1AQ13522 171 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 SMCO1Q147U7 214 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 TXN2Q99757 166 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 CCDC32Q9BV29 185 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 UFC1Q9Y3C8 167 aa11.79□□□□□ -0.52
LINC00339-209ENST00000635450 A8MWP6 167 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 NUPL2O15504 423 aaKnown RBP11.78□□□□□ -0.52
LINC00339-209ENST00000635450 GNG7O60262 68 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 NXPH3O95157 252 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 IGHV4-30-4P0DP06 118 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 FOLR2P14207 255 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 FCGR2BP31994 310 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-209ENST00000635450 HTR2BP41595 481 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 OR1S1Q8NH92 325 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-209ENST00000635450 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
LINC00339-209ENST00000635450 TECRQ9NZ01 308 aaKnown RBP11.78□□□□□ -0.52
LINC00339-209ENST00000635450 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.52
LINC00339-209ENST00000635450 STARD9Q9P2P6 4700 aa11.77□□□□□ -0.52
LINC00339-209ENST00000635450 A0A1B0GU03 582 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 NDUFA4O00483 81 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 IGHV3-48P01763 117 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 CBLN1P23435 193 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 OPRK1P41145 380 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 NPBWR1P48145 328 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-209ENST00000635450 RELQ04864 619 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-209ENST00000635450 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 LRTM2Q8N967 370 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 MARC2Q969Z3 335 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
LINC00339-209ENST00000635450 TENM2Q9NT68 2774 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms