RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 COL6A3P12111 3177 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 A0A1B0GU03 582 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A10PA6NDY2 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A18PA6NE21 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A16PA6NEW6 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A20PA6NIJ5 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A12PA8MX19 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A5PA8MXJ8 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A23PA8MXZ1 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 TRGC2P03986 189 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A15PP0C7V4 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A13PP0C7W8 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A14PP0C7W9 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A24PP0C7X0 464 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM78Q5T7P6 136 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 VSIRQ9H7M9 311 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 KIAA1549Q9HCM3 1950 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 HECTD1Q9ULT8 2610 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 C10orf55Q5SWW7 151 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 ACP7Q6ZNF0 438 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 CLDND2Q8NHS1 167 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 METTL26Q96S19 204 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 NEU1Q99519 415 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 FOXA2Q9Y261 457 aaPredicted RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 TRAV24A0A0B4J272 114 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 IGHV2-5P01817 119 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 CD33P20138 364 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 KLRD1Q13241 179 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 NSUN5P1Q3KNT7 163 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 CLEC19AQ6UXS0 136 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 Q6ZRM9 215 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM116Q8NCL8 245 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 MRPL20Q9BYC9 149 aaKnown RBP6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 OR51M1Q9H341 326 aa6.89□□□□□ -1.31
PTPDC1-204ENST00000620992 SETXQ7Z333 2677 aaKnown RBP6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 MUC3AQ02505 3323 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 KIR2DL2P43627 348 aaPredicted RBP6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 PAX9P55771 341 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 RIPPLY3P57055 190 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 LINC00205P59089 165 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 LEMD1Q68G75 181 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 PCSK4Q6UW60 755 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 COLCA1Q6ZS62 124 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 DUXBA0A1W2PPF3 345 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 PSMB11A5LHX3 300 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 ELOBQ15370 118 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 ATP6V1FQ16864 119 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 KLF17Q5JT82 389 aaPredicted RBP6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF506Q5JVG8 444 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 ODF3L1Q8IXM7 274 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 PLPPR1Q8TBJ4 325 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 GGACTQ9BVM4 153 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 IGHV1-18A0A0C4DH31 117 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 SCGB1C2P0DMR2 95 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 KHDC3LQ587J8 217 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 GCSAMQ8N6F7 178 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 SGMS2Q8NHU3 365 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF418Q8TF45 676 aaPredicted RBP6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 PKIBQ9C010 78 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
PTPDC1-204ENST00000620992 USF1P22415 310 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 MFAP4P55083 255 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 WDR25Q64LD2 544 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 SAXO1Q8IYX7 474 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF645Q8N7E2 425 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 OR2T10Q8NGZ9 312 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM45BQ96B21 275 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 A0A1B0GW64 132 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 SNURFLB1AK76 121 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 GFI1BQ5VTD9 330 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 MBNL2Q5VZF2 373 aaKnown RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF324BQ6AW86 544 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 VKORC1Q9BQB6 163 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 GPR61Q9BZJ8 451 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 A0A0G2JNJ9 132 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 SS18L1O75177 396 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 NPPCP23582 126 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms