RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ACOT6Q3I5F7 207 aaPredicted RBP17.27■□□□□ 0.36
SGMS1-210ENST00000619438 AKIRIN2Q53H80 203 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 C1orf122Q6ZSJ8 110 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 OR5AN1Q8NGI8 311 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 TVP23CQ96ET8 276 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 NIPSNAP3BQ9BS92 247 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 FKBP11Q9NYL4 201 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 MLXQ9UH92 298 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 IGHV1-69DA0A0B4J2H0 117 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ZFP92A6NM28 416 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 SEC14L6B5MCN3 397 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 FNDC10F2Z333 226 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 M0R1W7 72 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 CYB5BO43169 146 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 IGHV1-69P01742 117 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 MAS1LP35410 378 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ZNF137PP52743 207 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 RPS16P62249 146 aaKnown RBP17.26■□□□□ 0.35
SGMS1-210ENST00000619438 SMUG1Q53HV7 270 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 FAM90A2PQ658T7 463 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ZNF48Q96MX3 618 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-210ENST00000619438 DUX5Q96PT3 197 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 C20orf24Q9BUV8 137 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ESM1Q9NQ30 184 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 APOA2P02652 100 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 CRYBA1P05813 215 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 FBP1P09467 338 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 OPRK1P41145 380 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 AKR1C3P42330 323 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 PRB3Q04118 309 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-210ENST00000619438 DEFB112Q30KQ8 113 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ABHD12Q8N2K0 398 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 HIST1H2BAQ96A08 127 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 ENY2Q9NPA8 101 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 OR51B2Q9Y5P1 312 aa17.26■□□□□ 0.35
SGMS1-210ENST00000619438 TET2Q6N021 2002 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-210ENST00000619438 hCG_1809904A0A1W2PP81 198 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PPE2 198 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PR64 198 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PRV1 198 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 PRCDQ00LT1 54 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 TMEM177Q53S58 311 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 TREML4Q6UXN2 200 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 SLC24A4Q8NFF2 622 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 MANBALQ9NQG1 85 aa17.25■□□□□ 0.35
SGMS1-210ENST00000619438 MDFIC2A0A1B0GVS7 189 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 B4DEV8 164 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 H0YJW9 148 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 J3QR06 171 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 KBTBD11O94819 623 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 IGKV1-16P04430 117 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 NPY1RP25929 384 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 DLX1P56177 255 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 PNRC1Q12796 327 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-210ENST00000619438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-210ENST00000619438 ST6GALNAC6Q969X2 333 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 MRPL20Q9BYC9 149 aaKnown RBP17.24■□□□□ 0.35
SGMS1-210ENST00000619438 KCNIP2Q9NS61 270 aa17.24■□□□□ 0.35
SGMS1-210ENST00000619438 LSM4Q9Y4Z0 139 aaKnown RBP17.24■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PRD5 423 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PRF3 423 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 A0A1W2PRM7 423 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 SRRM4A7MD48 611 aaKnown RBP17.23■□□□□ 0.35
SGMS1-210ENST00000619438 PRTN3P24158 256 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 ERVFRD-1P60508 538 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 OR5B3Q8NH48 314 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 RAB24Q969Q5 203 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 SLC25A22Q9H936 323 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 NPVFQ9HCQ7 196 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 ZNRD1Q9P1U0 126 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 IFNA4P05014 189 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 OR9G1Q8NH87 305 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 YPEL4Q96NS1 127 aa17.23■□□□□ 0.35
SGMS1-210ENST00000619438 DNAJC9-AS1A6NH13 148 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 MEF2BQ02080 365 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-210ENST00000619438 KLRD1Q13241 179 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 PDPNQ86YL7 162 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 OR10X1Q8NGY0 326 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 OR4A5Q8NH83 315 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 TNFRSF14Q92956 283 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 NABP2Q9BQ15 211 aa17.22■□□□□ 0.35
SGMS1-210ENST00000619438 CXorf65A6NEN9 183 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 INS-IGF2F8WCM5 200 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 TMEM250H0YL14 139 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 SAA1P0DJI8 122 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-210ENST00000619438 CDC34P49427 236 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-210ENST00000619438 PSMB3P49720 205 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 CEBPGP53567 150 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 HNF4GQ14541 408 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 BSXQ3C1V8 233 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 MALSU1Q96EH3 234 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 MGST2Q99735 147 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 GGTLC1Q9BX51 225 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 PLEKHA3Q9HB20 300 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 TNFRSF19Q9NS68 423 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 TENM1Q9UKZ4 2725 aa17.21■□□□□ 0.35
SGMS1-210ENST00000619438 TEX50A0A1B0GTY4 177 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 HOXA3O43365 443 aaPredicted RBP17.2■□□□□ 0.34
SGMS1-210ENST00000619438 CA2P00918 260 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 IGHV1-8P0DP01 117 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms