RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 MKRN2OSH3BPM6 223 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 KLK10O43240 276 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 C10orf55Q5SWW7 151 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 LINC00479Q96M42 142 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 CACNA1BQ00975 2339 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 AHRRA9YTQ3 701 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 SAA1P0DJI8 122 aaPredicted RBP10.34□□□□□ -0.75
MSH6-213ENST00000614496 COL8A1P27658 744 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 GNG5P63218 68 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 TMEM144Q7Z5S9 345 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 ST6GALNAC3Q8NDV1 305 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 MRPL20Q9BYC9 149 aaKnown RBP10.34□□□□□ -0.75
MSH6-213ENST00000614496 A0A1W2PN81 502 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 DLL1O00548 723 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
MSH6-213ENST00000614496 CD59P13987 128 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 HTR1DP28221 377 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
MSH6-213ENST00000614496 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 PGLYRP4Q96LB8 373 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 PYGO2Q9BRQ0 406 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 ASCL3Q9NQ33 180 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 TMEM11P17152 192 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 ZNF134P52741 427 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 RNF2Q99496 336 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 F2Z2F3 143 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 MMDQ15546 238 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 ERASQ7Z444 233 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 RAB1CQ92928 201 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 ZNF430Q9H8G1 570 aaPredicted RBP10.33□□□□□ -0.76
MSH6-213ENST00000614496 GLRXP35754 106 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 OR4C5Q8NGB2 326 aa10.33□□□□□ -0.76
MSH6-213ENST00000614496 SNRNP40Q96DI7 357 aaKnown RBP10.33□□□□□ -0.76
MSH6-213ENST00000614496 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 ATG2AQ2TAZ0 1938 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 CBY3A6NI87 242 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 UPK2O00526 184 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 WISP2O76076 250 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 IGKV1-16P04430 117 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 SFXN3Q9BWM7 321 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 PPIAL4AQ9Y536 164 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 TYMSP04818 313 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 PERPQ96FX8 193 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 OR8B2Q96RD0 313 aa10.32□□□□□ -0.76
MSH6-213ENST00000614496 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 Q6ZWC4 215 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 FAM90A1Q86YD7 464 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 ZNF71Q9NQZ8 489 aaPredicted RBP10.31□□□□□ -0.76
MSH6-213ENST00000614496 EXPH5Q8NEV8 1989 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 PPIAL4EA0A075B759 164 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 TRBV9A0A0B4J1U6 114 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 ZNF891A8MT65 544 aaPredicted RBP10.31□□□□□ -0.76
MSH6-213ENST00000614496 PPIAL4DF5H284 164 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 TNFSF13O75888 250 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 PPIAL4FP0DN26 164 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 CENPVQ7Z7K6 275 aaPredicted RBP10.31□□□□□ -0.76
MSH6-213ENST00000614496 OR52E5Q8NH55 327 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 ISLRO14498 428 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 FTH1P19P0C7X4 201 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 ZNF883P0CG24 379 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 VDAC2P45880 294 aaPredicted RBP10.31□□□□□ -0.76
MSH6-213ENST00000614496 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 SSX8Q7RTT4 187 aa10.31□□□□□ -0.76
MSH6-213ENST00000614496 TEX50A0A1B0GTY4 177 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 K7EQM0 130 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 COL8A2P25067 703 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 TMEM177Q53S58 311 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 TCF24Q7RTU0 167 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 WASHC3Q9Y3C0 194 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 IGKV3-15P01624 115 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 FRMD6-AS1P0C7T7 363 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 C1orf162Q8NEQ5 155 aaPredicted RBP10.3□□□□□ -0.76
MSH6-213ENST00000614496 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 NGBQ9NPG2 151 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 C15orf65H3BRN8 121 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 HYPMO75409 117 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 ETFRF1Q6IPR1 90 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 FA2HQ7L5A8 372 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 RPEQ96AT9 228 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 DCAF16Q9NXF7 216 aa10.3□□□□□ -0.76
MSH6-213ENST00000614496 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 PEX7O00628 323 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 LGALS4P56470 323 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 GFRALQ6UXV0 394 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms