RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 TMEM268Q5VZI3 342 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 UNQ9165/PRO28630Q6UXU0 137 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
CCND3-222ENST00000612455 TXN2Q99757 166 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 SLC25A21Q9BQT8 299 aaPredicted RBP12.63□□□□□ -0.39
CCND3-222ENST00000612455 CHRDL1Q9BU40 450 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
CCND3-222ENST00000612455 ZNF320A2RRD8 509 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 CTSGP08311 255 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 RNASE2P10153 161 aaKnown RBP12.62□□□□□ -0.39
CCND3-222ENST00000612455 AKR1C4P17516 323 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
CCND3-222ENST00000612455 SPINK9Q5DT21 86 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 PALMDQ9NP74 551 aa12.62□□□□□ -0.39
CCND3-222ENST00000612455 GAR1Q9NY12 217 aaKnown RBP12.62□□□□□ -0.39
CCND3-222ENST00000612455 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 NDUFA4O00483 81 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 MT-CO2P00403 227 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 SNCAP37840 140 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 MFAP4P55083 255 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 TM4SF20Q53R12 229 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
CCND3-222ENST00000612455 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 MISP3Q96FF7 219 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 C19orf73Q9NVV2 129 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 MRPL27Q9P0M9 148 aaKnown RBP12.61□□□□□ -0.39
CCND3-222ENST00000612455 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
CCND3-222ENST00000612455 IGHV3-35A0A0C4DH35 117 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 SUB1P53999 127 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCND3-222ENST00000612455 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 C11orf87Q6NUJ2 197 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 UXS1Q8NBZ7 420 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 CACNG8Q8WXS5 425 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 TMEM190Q8WZ59 177 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 PRR13Q9NZ81 148 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 CACFD1Q9UGQ2 172 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 UFC1Q9Y3C8 167 aa12.6□□□□□ -0.39
CCND3-222ENST00000612455 K7EMT4 169 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 FRMD6-AS1P0C7T7 363 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 ANXA3P12429 323 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 SRPXP78539 464 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 Q56UQ5 140 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
CCND3-222ENST00000612455 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 LGI3Q8N145 548 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 ENY2Q9NPA8 101 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 MLXQ9UH92 298 aa12.59□□□□□ -0.39
CCND3-222ENST00000612455 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 SULT1A3P0DMM9 295 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 SULT1A4P0DMN0 295 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 HOXA1P49639 335 aaPredicted RBP12.58□□□□□ -0.4
CCND3-222ENST00000612455 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 LRTM2Q8N967 370 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 ASCL2Q99929 193 aa12.58□□□□□ -0.4
CCND3-222ENST00000612455 TRAV25A0A0B4J276 109 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 PIGBOS1A0A0B4J2F0 54 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 CORTO00230 105 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 CCR6P51684 374 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 TMED4Q7Z7H5 227 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
CCND3-222ENST00000612455 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
CCND3-222ENST00000612455 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
CCND3-222ENST00000612455 DAZ1Q9NQZ3 744 aaKnown RBP12.57□□□□□ -0.4
CCND3-222ENST00000612455 A0A1B0GU03 582 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 C15orf62A8K5M9 175 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 NUPL2O15504 423 aaKnown RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 SFT2D2O95562 160 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 TMEM50AO95807 157 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 HTR2BP41595 481 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 NPBWR1P48145 328 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 RELQ04864 619 aaPredicted RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 SMCO1Q147U7 214 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 RBMS2Q15434 407 aaKnown RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 MLANAQ16655 118 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 LINC00299Q6ZSB3 139 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 TMEM61Q8N0U2 210 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 DUSP18Q8NEJ0 188 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 OR10C1Q96KK4 312 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 HSPB7Q9UBY9 170 aa12.56□□□□□ -0.4
CCND3-222ENST00000612455 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
CCND3-222ENST00000612455 GNG7O60262 68 aa12.55□□□□□ -0.4
CCND3-222ENST00000612455 PITX3O75364 302 aa12.55□□□□□ -0.4
CCND3-222ENST00000612455 NDUFB6O95139 128 aa12.55□□□□□ -0.4
CCND3-222ENST00000612455 IL7P13232 177 aa12.55□□□□□ -0.4
CCND3-222ENST00000612455 UBE2MP61081 183 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms