RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	LDLRAD2	Q5SZI1	272 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	MRPL41	Q8IXM3	137 aa	Known RBP	13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	ZNF843	Q8N446	348 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	SIGLEC9	Q9Y336	463 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	PXMP4	Q9Y6I8	212 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	IGHV2-70D	A0A0C4DH43	119 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	TMEM250	H0YL14	139 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	CDC34	P49427	236 aa	Predicted RBP	13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	CD81	P60033	236 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	MEF2B	Q02080	365 aa	Predicted RBP	13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	OR51M1	Q9H341	326 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	NAT8	Q9UHE5	227 aa		13.7	□□□□□ -0.22
RDH13-223	ENST00000610356	TRBV24-1	A0A075B6N3	115 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	SUB1	P53999	127 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	LMO4	P61968	165 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	PAX2	Q02962	417 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	WT1-AS	Q06250	92 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	TNXA	Q16473	311 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	MIC13	Q5XKP0	118 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	CYP2G1P	Q6ZSU1	146 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	RAB24	Q969Q5	203 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	C1orf159	Q96HA4	380 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	FAM210B	Q96KR6	192 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	DOK5	Q9P104	306 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	HILPDA	Q9Y5L2	63 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	URGCP-MRPS24	S4R325	110 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	DOPEY1	Q5JWR5	2465 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	DCHS2	Q6V1P9	2916 aa		13.69	□□□□□ -0.22
RDH13-223	ENST00000610356	HMGB3	O15347	200 aa	Known RBP	13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	VENTX	O95231	258 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	HOXB4	P17483	251 aa	Predicted RBP	13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	RPL27A	P46776	148 aa	Known RBP	13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	CD69	Q07108	199 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	LHFPL4	Q7Z7J7	247 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	SIRPD	Q9H106	197 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	MANBAL	Q9NQG1	85 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	NIT2	Q9NQR4	276 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	GSN-AS1	Q9NRJ2	163 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	ARHGAP32	A7KAX9	2087 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	SEC14L6	B5MCN3	397 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	YIF1A	O95070	293 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	FABP1	P07148	127 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	PSMB3	P49720	205 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	TMEM144	Q7Z5S9	345 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	PPP1R27	Q86WC6	154 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356	CFHR4	Q92496	578 aa		13.68	□□□□□ -0.22
RDH13-223	ENST00000610356		A0A1W2PRD5	423 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356		A0A1W2PRF3	423 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356		A0A1W2PRM7	423 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BK	O60814	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	FOXH1	O75593	365 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BJ	P06899	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BO	P23527	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	S100P	P25815	95 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BB	P33778	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BD	P58876	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BC	P62807	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST2H2BE	Q16778	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	TMEM241	Q24JQ0	296 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	TMEM249	Q2WGJ8	235 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	GCSAML	Q5JQS6	135 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	SSMEM1	Q8WWF3	244 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	CACNG8	Q8WXS5	425 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BH	Q93079	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BN	Q99877	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	HIST1H2BM	Q99879	126 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	PIMREG	Q9BSJ6	248 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356	FBXL15	Q9H469	300 aa		13.67	□□□□□ -0.22
RDH13-223	ENST00000610356		A0A1W2PPV4	95 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	GPX4	P36969	197 aa	Predicted RBP	13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	RPL29	P47914	159 aa	Known RBP	13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	COMP	P49747	757 aa	Predicted RBP	13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	PLGLA	Q15195	96 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	MINOS1	Q5TGZ0	78 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	CCDC144NL	Q6NUI1	221 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	STPG3	Q8N7X2	389 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	SLC35E1	Q96K37	410 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	MINOS1-NBL1	R4GNA1	71 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	IGLC7	A0M8Q6	106 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	IFITM10	A6NMD0	228 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	OOSP1	A8MZH6	123 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	PHOX2A	O14813	284 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	TOX4	O94842	621 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	TRGC2	P03986	189 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	DEFA4	P12838	97 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	LGALS4	P56470	323 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	NDUFA6	P56556	154 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	GNB1	P62873	340 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	GAMT	Q14353	236 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	MMD	Q15546	238 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	SMIM7	Q9BQ49	75 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	PYGO2	Q9BRQ0	406 aa		13.66	□□□□□ -0.22
RDH13-223	ENST00000610356	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.65	□□□□□ -0.22
RDH13-223	ENST00000610356	FAM168A	Q92567	244 aa		13.65	□□□□□ -0.22
RDH13-223	ENST00000610356	MOS	P00540	346 aa		13.64	□□□□□ -0.23
RDH13-223	ENST00000610356	SSX2	Q16385	188 aa		13.64	□□□□□ -0.23
RDH13-223	ENST00000610356	ZNF114	Q8NC26	417 aa		13.64	□□□□□ -0.23
RDH13-223	ENST00000610356	NDUFS8	O00217	210 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms