RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 HLA-DMAP28067 261 aa10.94□□□□□ -0.66
CTSA-216ENST00000607212 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
CTSA-216ENST00000607212 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
CTSA-216ENST00000607212 GPR141Q7Z602 305 aa10.94□□□□□ -0.66
CTSA-216ENST00000607212 IGHV3-66A0A0C4DH42 116 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 ZNF701M0R085 212 aaPredicted RBP10.93□□□□□ -0.66
CTSA-216ENST00000607212 TAS2R20P59543 309 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 ERHP84090 104 aaKnown RBP10.93□□□□□ -0.66
CTSA-216ENST00000607212 TMEM187Q14656 261 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 CENPSQ8N2Z9 138 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 SAMD12Q8N8I0 201 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 C2CD4CQ8TF44 421 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 TXN2Q99757 166 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 RABAC1Q9UI14 185 aa10.93□□□□□ -0.66
CTSA-216ENST00000607212 DBX1A6NMT0 343 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 PRSS3P35030 304 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 HRH1P35367 487 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 SPINK9Q5DT21 86 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 LEMD1Q68G75 181 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 LPCAT3Q6P1A2 487 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 TBC1D26Q86UD7 250 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 CLVS1Q8IUQ0 354 aaPredicted RBP10.92□□□□□ -0.66
CTSA-216ENST00000607212 CROCCP3Q8IVE0 287 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 STHQ8IWL8 128 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 NXF2Q9GZY0 626 aaKnown RBP10.92□□□□□ -0.66
CTSA-216ENST00000607212 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
CTSA-216ENST00000607212 IGLL5B9A064 214 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 I3L2K1 104 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 DEFB131AP59861 70 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 LSM3P62310 102 aaKnown RBP10.91□□□□□ -0.66
CTSA-216ENST00000607212 DUSP18Q8NEJ0 188 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 ST8SIA2Q92186 375 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 C11orf68Q9H3H3 251 aaKnown RBP10.91□□□□□ -0.66
CTSA-216ENST00000607212 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
CTSA-216ENST00000607212 TMEM127O75204 238 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 CD5P06127 495 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 TGFBR1P36897 503 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 SNCAP37840 140 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 NPBWR1P48145 328 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 PRCDQ00LT1 54 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 SLC35G3Q8N808 338 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 OR10C1Q96KK4 312 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 PDCD10Q9BUL8 212 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
CTSA-216ENST00000607212 DFFBO76075 338 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 PGAM2P15259 253 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 CADM3Q8N126 398 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 KRTAP17-1Q9BYP8 105 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 ENY2Q9NPA8 101 aa10.89□□□□□ -0.67
CTSA-216ENST00000607212 PUS1Q9Y606 427 aaKnown RBP eCLIP10.89□□□□□ -0.67
CTSA-216ENST00000607212 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 IFNA17P01571 189 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 APOHP02749 345 aaPredicted RBP10.88□□□□□ -0.67
CTSA-216ENST00000607212 HOXA1P49639 335 aaPredicted RBP10.88□□□□□ -0.67
CTSA-216ENST00000607212 AKR1C2P52895 323 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 HSPE1P61604 102 aaKnown RBP10.88□□□□□ -0.67
CTSA-216ENST00000607212 GPR107Q5VW38 600 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 FAM90A2PQ658T7 463 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 ZNF600Q6ZNG1 722 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 SNX29P2Q8IUI4 249 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 ZNF114Q8NC26 417 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
CTSA-216ENST00000607212 NARS2Q96I59 477 aaKnown RBP10.88□□□□□ -0.67
CTSA-216ENST00000607212 SEC22AQ96IW7 307 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 ANAPC10Q9UM13 185 aa10.88□□□□□ -0.67
CTSA-216ENST00000607212 H3BMQ9 156 aa10.87□□□□□ -0.67
CTSA-216ENST00000607212 NAT1P18440 290 aa10.87□□□□□ -0.67
CTSA-216ENST00000607212 RPS19P39019 145 aaKnown RBP10.87□□□□□ -0.67
CTSA-216ENST00000607212 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTSA-216ENST00000607212 RNASE12Q5GAN4 147 aaKnown RBP10.87□□□□□ -0.67
CTSA-216ENST00000607212 TMEM230Q96A57 120 aa10.87□□□□□ -0.67
CTSA-216ENST00000607212 NAA50Q9GZZ1 169 aaKnown RBP10.87□□□□□ -0.67
CTSA-216ENST00000607212 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
CTSA-216ENST00000607212 KMT2AQ03164 3969 aa10.87□□□□□ -0.67
CTSA-216ENST00000607212 A0A1B0GVG6 124 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 A0A1W2PS18 150 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 NPPCP23582 126 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 RCVRNP35243 200 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 TMBIM6P55061 237 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 TCTAP57738 103 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 LYSMD2Q8IV50 215 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 FAM24BQ8N5W8 94 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 METTL26Q96S19 204 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 VSIRQ9H7M9 311 aa10.86□□□□□ -0.67
CTSA-216ENST00000607212 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
CTSA-216ENST00000607212 M0QYG6 137 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 ATG12O94817 140 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 IGKV1-39P01597 117 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 IGKV1D-39P04432 117 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 OPRK1P41145 380 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 PRR20EP86478 221 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 PRR20CP86479 221 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 PRR20DP86480 221 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 PRR20BP86481 221 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 PRR20AP86496 221 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms