RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TMEM14EPQ6UXP3 125 aa13.9□□□□□ -0.18
PPFIA3-207ENST00000602716 OSR1Q8TAX0 266 aaPredicted RBP13.9□□□□□ -0.18
PPFIA3-207ENST00000602716 RBKSQ9H477 322 aa13.9□□□□□ -0.18
PPFIA3-207ENST00000602716 TBL2Q9Y4P3 447 aaKnown RBP13.9□□□□□ -0.18
PPFIA3-207ENST00000602716 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 FGF8P55075 233 aaPredicted RBP13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 SLC38A11Q08AI6 406 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 OR4C13Q8NGP0 309 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 TAF15Q92804 592 aaKnown RBP eCLIP13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 PINX1Q96BK5 328 aaKnown RBP13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 TMPRSS5Q9H3S3 457 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 NIT2Q9NQR4 276 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 GSN-AS1Q9NRJ2 163 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 HSPB7Q9UBY9 170 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 URGCP-MRPS24S4R325 110 aa13.89□□□□□ -0.19
PPFIA3-207ENST00000602716 FABP1P07148 127 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 HOXA5P20719 270 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 PNRC1Q12796 327 aaPredicted RBP13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 HNF4GQ14541 408 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 FAM120AOSQ5T036 256 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 ZDHHC16Q969W1 377 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 P2RX4Q99571 388 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 A0A0U1RQK1 487 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 UBE2L5PA0A1B0GUS4 154 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 SLC25A17O43808 307 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 HRASP01112 189 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 IGKV1D-33P01593 117 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 IGKV1-33P01594 117 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 IL6RP08887 468 aaPredicted RBP13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 MC5RP33032 325 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 MRGPRG-AS1Q2M3A8 158 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 TIMM9Q9Y5J7 89 aa13.88□□□□□ -0.19
PPFIA3-207ENST00000602716 MAP1LC3B2A6NCE7 125 aa13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 PMS2P11Q13670 270 aa13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 CENPVQ7Z7K6 275 aaPredicted RBP13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 MAP1LC3BQ9GZQ8 125 aa13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 VAX2Q9UIW0 290 aa13.87□□□□□ -0.19
PPFIA3-207ENST00000602716 C15orf61A6NNL5 157 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 KBTBD11O94819 623 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 GATA3P23771 443 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 C10orf55Q5SWW7 151 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 TMEM242Q9NWH2 141 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 ZFHX3Q15911 3703 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 LINC00587B1AMM8 73 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 UPK2O00526 184 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 YIF1AO95070 293 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 OPN1MWP04001 364 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 OPN1MW2P0DN77 364 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 OPN1MW3P0DN78 364 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 RND2P52198 227 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 OR51M1Q9H341 326 aa13.86□□□□□ -0.19
PPFIA3-207ENST00000602716 FLNAP21333 2647 aaKnown RBP13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 IFITM10A6NMD0 228 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 CYB5BO43169 146 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 IFNA1P01562 189 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 CD1BP29016 333 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 CDX1P47902 265 aaPredicted RBP13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 KRTAP1-1Q07627 177 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 PSG5Q15238 335 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 AARDQ4LEZ3 155 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 RPP25LQ8N5L8 163 aaKnown RBP13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 OR4A16Q8NH70 328 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 EAF1Q96JC9 268 aaPredicted RBP13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 BET1LQ9NYM9 111 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 DOK5Q9P104 306 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 MDFIC2A0A1B0GVS7 189 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 FAM90A9PA6NNJ1 464 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 CEBPZOSA8MTT3 80 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 OOSP1A8MZH6 123 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 CCDC144NLQ6NUI1 221 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 TMEM14BQ9NUH8 114 aa13.85□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BKO60814 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BJP06899 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 FOSL1P15407 271 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BOP23527 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BBP33778 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 NDUFA6P56556 154 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BDP58876 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BCP62807 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HES1Q14469 280 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST2H2BEQ16778 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BHQ93079 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BNQ99877 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 HIST1H2BMQ99879 126 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 FBXL15Q9H469 300 aa13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 ZNF430Q9H8G1 570 aaPredicted RBP13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 FOXA2Q9Y261 457 aaPredicted RBP13.84□□□□□ -0.19
PPFIA3-207ENST00000602716 NOTCH2Q04721 2471 aa13.83□□□□□ -0.19
PPFIA3-207ENST00000602716 PMS2P5A8MQ11 134 aa13.83□□□□□ -0.2
PPFIA3-207ENST00000602716 E7EUB6 86 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms