RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	TGOLN2	O43493	480 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	LY86	O95711	162 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	SULT1A3	P0DMM9	295 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	SULT1A4	P0DMN0	295 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	VAMP1	P23763	118 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	SNCA	P37840	140 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	PPP1R1A	Q13522	171 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	ANKRD55	Q3KP44	614 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	DEFB121	Q5J5C9	76 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	PVRIG	Q6DKI7	326 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	PLET1	Q6UQ28	207 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	ADAMTSL5	Q6ZMM2	481 aa		10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	BSCL2	Q96G97	398 aa	Predicted RBP	10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	LSM4	Q9Y4Z0	139 aa	Known RBP	10.85	□□□□□ -0.67
PSMC4-205	ENST00000601194	PIGBOS1	A0A0B4J2F0	54 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	TMEM213	A2RRL7	107 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	C2orf70	A6NJV1	201 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	CENPX	A8MT69	81 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194		A8MWP6	167 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	SFT2D2	O95562	160 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	MT-CO2	P00403	227 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	RNASE2	P10153	161 aa	Known RBP	10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	GP9	P14770	177 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	UBE2M	P61081	183 aa	Known RBP	10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	DCTN2	Q13561	401 aa	Known RBP	10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	BSX	Q3C1V8	233 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	FAM106A	Q4KMX7	169 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	SPSB3	Q6PJ21	355 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	UNQ9165/PRO28630	Q6UXU0	137 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	LRTM2	Q8N967	370 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	CHRDL1	Q9BU40	450 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	ENY2	Q9NPA8	101 aa		10.84	□□□□□ -0.67
PSMC4-205	ENST00000601194	IGHV3-35	A0A0C4DH35	117 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	DUXB	A0A1W2PPF3	345 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	PLA2G10	O15496	165 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	FOLR2	P14207	255 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	EDN2	P20800	178 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	FCGR2B	P31994	310 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	ADM	P35318	185 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	SMCO1	Q147U7	214 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	UBAC2	Q8NBM4	344 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	CCDC32	Q9BV29	185 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	PTTG2	Q9NZH5	202 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	CACFD1	Q9UGQ2	172 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	FLVCR2	Q9UPI3	526 aa		10.83	□□□□□ -0.68
PSMC4-205	ENST00000601194	ZNF320	A2RRD8	509 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	NXPH3	O95157	252 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	IGHV3-48	P01763	117 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	CTSG	P08311	255 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	SUB1	P53999	127 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	TNFRSF9	Q07011	255 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194		Q56UQ5	140 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	S100Z	Q8WXG8	99 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	CACNG8	Q8WXS5	425 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	TMEM190	Q8WZ59	177 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	PINX1	Q96BK5	328 aa	Known RBP	10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	TXN2	Q99757	166 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	GAR1	Q9NY12	217 aa	Known RBP	10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	HSPB7	Q9UBY9	170 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194	COL7A1	Q02388	2944 aa		10.82	□□□□□ -0.68
PSMC4-205	ENST00000601194		A0A1B0GU03	582 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	C9orf170	A2RU37	121 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	IZUMO1R	A6ND01	250 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	CEBPZOS	A8MTT3	80 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	CORT	O00230	105 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	LYRM1	O43325	122 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	CBLN1	P23435	193 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	HTR2B	P41595	481 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	MFAP4	P55083	255 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	LCN12	Q6JVE5	192 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	C11orf87	Q6NUJ2	197 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	OR2K2	Q8NGT1	345 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	ZNF414	Q96IQ9	312 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	HEYL	Q9NQ87	328 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	BATF3	Q9NR55	127 aa		10.81	□□□□□ -0.68
PSMC4-205	ENST00000601194	NUPL2	O15504	423 aa	Known RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	PITX3	O75364	302 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	ANXA7	P20073	488 aa	Known RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	ELL	P55199	621 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	DEFB114	Q30KQ6	69 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	CD300E	Q496F6	205 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	TM4SF20	Q53R12	229 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	SLC24A4	Q8NFF2	622 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	DYNLRB2	Q8TF09	96 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	TMEM170A	Q8WVE7	144 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	B9D2	Q9BPU9	175 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	PALMD	Q9NP74	551 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	TECR	Q9NZ01	308 aa	Known RBP	10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	UFC1	Q9Y3C8	167 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	TMED3	Q9Y3Q3	217 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	DNAH9	Q9NYC9	4486 aa		10.8	□□□□□ -0.68
PSMC4-205	ENST00000601194	NDUFA4	O00483	81 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194	OR4E1	P0C645	316 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194	C8orf88	P0DMB2	117 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194	SLC25A6	P12236	298 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194	DHRS2	Q13268	280 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194	C2orf83	Q53S99	150 aa		10.79	□□□□□ -0.68
PSMC4-205	ENST00000601194		Q8N1Y9	231 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms