RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 HSPE1P61604 102 aaKnown RBP6.8□□□□□ -1.32
TRIM28-214ENST00000600840 ID3Q02535 119 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 WT1-ASQ06250 92 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 KIAA0141Q14154 515 aaPredicted RBP6.8□□□□□ -1.32
TRIM28-214ENST00000600840 SMCO1Q147U7 214 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 PRSS54Q6PEW0 395 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 H2BFWTQ7Z2G1 175 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 SLC35E3Q7Z769 313 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 STPG2Q8N412 459 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 LINC00482Q8N8I6 264 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 OR4D5Q8NGN0 318 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 OR5B3Q8NH48 314 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 OR52E5Q8NH55 327 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 SRSF12Q8WXF0 261 aaKnown RBP6.8□□□□□ -1.32
TRIM28-214ENST00000600840 ST8SIA2Q92186 375 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 DUX3Q96PT4 197 aa6.8□□□□□ -1.32
TRIM28-214ENST00000600840 FAM103A1Q9BTL3 118 aaKnown RBP6.8□□□□□ -1.32
TRIM28-214ENST00000600840 QTRT1Q9BXR0 403 aaKnown RBP6.8□□□□□ -1.32
TRIM28-214ENST00000600840 PSMB11A5LHX3 300 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 I3L521 148 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 AP4M1O00189 453 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 ST8SIA3O43173 380 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 CFDP00746 253 aaPredicted RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 NMBP08949 121 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 ERVK-16P61578 105 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 RPL23AP62750 156 aaKnown RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 TNXAQ16473 311 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 CXorf66Q5JRM2 361 aaPredicted RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 PVRIGQ6DKI7 326 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 MRPL41Q8IXM3 137 aaKnown RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 TTC9CQ8N5M4 171 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 RNF152Q8N8N0 203 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 LFNGQ8NES3 379 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 OR10W1Q8NGF6 305 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 OR4X2Q8NGF9 303 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 ARPC1AQ92747 370 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 RRNAD1Q96FB5 475 aaKnown RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 AQP10Q96PS8 301 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 C11orf1Q9H5F2 150 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.79□□□□□ -1.32
TRIM28-214ENST00000600840 HSPB7Q9UBY9 170 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 CACNG5Q9UF02 275 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 PRNDQ9UKY0 176 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 OR51B2Q9Y5P1 312 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
TRIM28-214ENST00000600840 RYR2Q92736 4967 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 MFSD2BA6NFX1 497 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 FAM25EA8MYX2 175 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 CCSO14618 274 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 RBMXL2O75526 392 aaKnown RBP6.78□□□□□ -1.32
TRIM28-214ENST00000600840 IGHG4P01861 327 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 AREGP15514 252 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 CTRB1P17538 263 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 AKR1C2P52895 323 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 PRCDQ00LT1 54 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 EGFEM1PQ0D2K5 195 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 PLGLAQ15195 96 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 CTRB2Q6GPI1 263 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 OR1L8Q8NGR8 309 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 MYOZ3Q8TDC0 251 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 TMEM170AQ8WVE7 144 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 TMEM68Q96MH6 324 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 SRSF8Q9BRL6 282 aaKnown RBP6.78□□□□□ -1.32
TRIM28-214ENST00000600840 ZNF471Q9BX82 626 aaPredicted RBP6.78□□□□□ -1.32
TRIM28-214ENST00000600840 FKBP11Q9NYL4 201 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 WSB1Q9Y6I7 421 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
TRIM28-214ENST00000600840 TRBV9A0A0B4J1U6 114 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 TRAV41A0A0B4J266 112 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 NPIPB5A8MRT5 1133 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 TMEM50AO95807 157 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 RPLP1P05386 114 aaKnown RBP6.77□□□□□ -1.33
TRIM28-214ENST00000600840 PSMB8P28062 276 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 MFAP2P55001 183 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 PAX9P55771 341 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 SPCS3P61009 180 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 GNB1P62873 340 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 C19orf35Q6ZS72 473 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 BAP18Q8IXM2 172 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 OR2C3Q8N628 320 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 OR4A16Q8NH70 328 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 SUN5Q8TC36 379 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 DCUN1D4Q92564 292 aa6.77□□□□□ -1.33
TRIM28-214ENST00000600840 SAT2Q96F10 170 aaPredicted RBP6.77□□□□□ -1.33
TRIM28-214ENST00000600840 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
TRIM28-214ENST00000600840 P2RX4Q99571 388 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms