RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PAX1P15863 534 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 ZNF585BQ52M93 769 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 C18orf12Q96KH6 178 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 CKS1BP61024 79 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 TMEM170AQ8WVE7 144 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 SELENOKQ9Y6D0 94 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 PSG7Q13046 419 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 Q6AWC8 147 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 DEPPQ9NTK1 212 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 SVILO95425 2214 aa9.92□□□□□ -0.82
SCN8A-208ENST00000599343 PRR31Q5SQ13 230 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 NPIPB13A6NJU9 1138 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 J3QW42 95 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 IGHV1-2P23083 117 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 TRAV9-1A0A075B6T8 112 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 IGKV1D-13A0A0B4J2D9 117 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 IGKV1-13P0DP09 117 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 IFI27P40305 119 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-208ENST00000599343 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 RAMP3O60896 148 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 LHX2P50458 406 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 RTN4RL2Q86UN3 420 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 TRIP12Q14669 1992 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-208ENST00000599343 PIKFYVEQ9Y2I7 2098 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 SLC25A20O43772 301 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 ANAPC13Q9BS18 74 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 C1QTNF5Q9BXJ0 243 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
SCN8A-208ENST00000599343 A6NNC1 897 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 HOXA3O43365 443 aaPredicted RBP9.9□□□□□ -0.82
SCN8A-208ENST00000599343 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 RNF126Q9BV68 326 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 AHCTF1Q8WYP5 2266 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 DPM2O94777 84 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
SCN8A-208ENST00000599343 SLC25A15Q9Y619 301 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 TGFBR3LH3BV60 316 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 SCN8AQ9UQD0 1980 aa9.9□□□□□ -0.82
SCN8A-208ENST00000599343 UPK2O00526 184 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 CDKN1AP38936 164 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 NPC2P61916 151 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 COLCA1Q6ZS62 124 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 STHQ8IWL8 128 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 CACNG8Q8WXS5 425 aa9.9□□□□□ -0.83
SCN8A-208ENST00000599343 A0A087WV48 116 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 DEFB104AQ8WTQ1 72 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 HBDP02042 147 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 UMODP07911 640 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 SRD5A1P18405 259 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 LDLRAD2Q5SZI1 272 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 KIR3DL3Q8N743 410 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 OR2K2Q8NGT1 345 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 FAM168AQ92567 244 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 ZNF318Q5VUA4 2279 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 CCL20P78556 96 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCN8A-208ENST00000599343 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 PRR32B1ATL7 298 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 CD28P10747 220 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 LINC00312Q9Y6C7 94 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 MDC1Q14676 2089 aaKnown RBP9.89□□□□□ -0.83
SCN8A-208ENST00000599343 UNC13CQ8NB66 2214 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 SCN2AQ99250 2005 aa9.89□□□□□ -0.83
SCN8A-208ENST00000599343 NBR2O15453 112 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 PLXNB2O15031 1838 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 TDRD15B5MCY1 1934 aaKnown RBP9.88□□□□□ -0.83
SCN8A-208ENST00000599343 TRAV9-2A0A087WT02 112 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 FOXL1Q12952 345 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 TMEM144Q7Z5S9 345 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 TMEM167AQ8TBQ9 72 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 A0A1W2PR77 199 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 GFRA3O60609 400 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 WFDC1Q9HC57 220 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
SCN8A-208ENST00000599343 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 A0A1B0GTI1 187 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 C15orf61A6NNL5 157 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 IGKCP01834 107 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 SRSF4Q08170 494 aaKnown RBP9.88□□□□□ -0.83
SCN8A-208ENST00000599343 NEU4Q8WWR8 484 aaPredicted RBP9.88□□□□□ -0.83
SCN8A-208ENST00000599343 RNF125Q96EQ8 232 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 VSIRQ9H7M9 311 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 SEPSECSQ9HD40 501 aaKnown RBP9.88□□□□□ -0.83
SCN8A-208ENST00000599343 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 PEMTQ9UBM1 199 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 IQCF6A8MYZ5 107 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 BTCP35070 178 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 ZIC4Q8N9L1 334 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 OCC1Q8TAD7 63 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 ORAOV1Q8WV07 137 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 ASCL2Q99929 193 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 PSG8Q9UQ74 426 aa9.88□□□□□ -0.83
SCN8A-208ENST00000599343 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms