RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 TMEM144Q7Z5S9 345 aa18.24■□□□□ 0.51
SPTBN4-210ENST00000596900 HRH4Q9H3N8 390 aa18.24■□□□□ 0.51
SPTBN4-210ENST00000596900 LSM4Q9Y4Z0 139 aaKnown RBP18.24■□□□□ 0.51
SPTBN4-210ENST00000596900 PIFOQ8TCI5 191 aa18.23■□□□□ 0.51
SPTBN4-210ENST00000596900 DEFA4P12838 97 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 FHITP49789 147 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 TEX29Q8N6K0 151 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 FAM103A1Q9BTL3 118 aaKnown RBP18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 IGHV7-81A0A0B4J1V7 117 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 H3BUX3 64 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 CTRB1P17538 263 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 GAMTQ14353 236 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 TMEM41BQ5BJD5 291 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 CTRB2Q6GPI1 263 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 C5orf56Q8N8D9 126 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 C22orf15Q8WYQ4 148 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 MISP3Q96FF7 219 aa18.22■□□□□ 0.51
SPTBN4-210ENST00000596900 UNC79Q9P2D8 2635 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 CYB5BO43169 146 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 FSHBP01225 129 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 ELLP55199 621 aaPredicted RBP18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 IL34Q6ZMJ4 242 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 MARC2Q969Z3 335 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 MGST2Q99735 147 aa18.21■□□□□ 0.51
SPTBN4-210ENST00000596900 NPIPB5A8MRT5 1133 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 TEX46H3BTG2 121 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 TSPAN15O95858 294 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 FFAR4Q5NUL3 377 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 TMEM219Q86XT9 240 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 LYPD6BQ8NI32 183 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 GGTLC1Q9BX51 225 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 WNT10AQ9GZT5 417 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 SVEP1Q4LDE5 3571 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 MFSD2BA6NFX1 497 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 M0QZK8 103 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 AGPAT2O15120 278 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 H2AFB1P0C5Y9 115 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 RAB2AP61019 212 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 NDPQ00604 133 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 C9orf139Q6ZV77 190 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 C16orf82Q7Z2V1 217 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 EIF4E3Q8N5X7 224 aaKnown RBP18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 RPRMQ9NS64 109 aa18.2■□□□□ 0.5
SPTBN4-210ENST00000596900 CRYGCP07315 174 aa18.19■□□□□ 0.5
SPTBN4-210ENST00000596900 FNDC4Q9H6D8 234 aaPredicted RBP18.19■□□□□ 0.5
SPTBN4-210ENST00000596900 SOX21Q9Y651 276 aaPredicted RBP18.19■□□□□ 0.5
SPTBN4-210ENST00000596900 RAB19A4D1S5 217 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 SMAD7O15105 426 aaKnown RBP18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 MFAP2P55001 183 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 ACOT6Q3I5F7 207 aaPredicted RBP18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 ACSM6Q6P461 480 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 CIARTQ8N365 385 aaPredicted RBP18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 LFNGQ8NES3 379 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 ACY3Q96HD9 319 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 ABCA1O95477 2261 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 FASNP49327 2511 aaKnown RBP18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 A6NDX4 124 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 HBE1P02100 147 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 MLANAQ16655 118 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 DEFB112Q30KQ8 113 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 TTC9CQ8N5M4 171 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 COMMD1Q8N668 190 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 SGMS2Q8NHU3 365 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 PXMP4Q9Y6I8 212 aa18.18■□□□□ 0.5
SPTBN4-210ENST00000596900 BTBD17A6NE02 478 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 M6PRP20645 277 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 RPL29P47914 159 aaKnown RBP18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 LY6EQ16553 131 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 TMEM68Q96MH6 324 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 HSPB9Q9BQS6 159 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 VSIRQ9H7M9 311 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 PDZD2O15018 2839 aa18.17■□□□□ 0.5
SPTBN4-210ENST00000596900 OR10G4Q8NGN3 311 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 OR10G9Q8NGN4 311 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 OR10G7Q8NGN6 311 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 OR2T6Q8NHC8 308 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 B2MP61769 119 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 ASPHD1Q5U4P2 390 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 UQCC3Q6UW78 93 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 C19orf35Q6ZS72 473 aa18.16■□□□□ 0.5
SPTBN4-210ENST00000596900 MT-CO2P00403 227 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 BCL6BQ8N143 479 aaPredicted RBP18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 OR5R1Q8NH85 324 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 SFT2D1Q8WV19 159 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 THYN1Q9P016 225 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 CSPG4Q6UVK1 2322 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 CELSR1Q9NYQ6 3014 aa18.15■□□□□ 0.5
SPTBN4-210ENST00000596900 MDFIC2A0A1B0GVS7 189 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 ATP6V0E1O15342 81 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 RND2P52198 227 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 MIC13Q5XKP0 118 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 TMEM116Q8NCL8 245 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 NPIPB3Q92617 1050 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 RCC1LQ96I51 464 aaKnown RBP18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 IGKV1OR2-108A0A075B7D4 117 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 I3L521 148 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 EGR2P11161 476 aaPredicted RBP18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 OR10J1P30954 320 aa18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 RPP25LQ8N5L8 163 aaKnown RBP18.14■□□□□ 0.49
SPTBN4-210ENST00000596900 STPG3Q8N7X2 389 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms