RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
USHBP1-206ENST00000596436 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 CENPXA8MT69 81 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 LYRM1O43325 122 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 SFT2D2O95562 160 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 IFNA17P01571 189 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 ANXA3P12429 323 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 ZP3P21754 424 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 VAMP1P23763 118 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 KLF5Q13887 457 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-206ENST00000596436 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 EEF1AKMT3Q96AZ1 226 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
USHBP1-206ENST00000596436 IGHV3-21A0A0B4J1V1 117 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 HLA-AP01891 365 aaKnown RBP12.1□□□□□ -0.47
USHBP1-206ENST00000596436 SYNJ2BPP57105 145 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 SRPXP78539 464 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 LGI3Q8N145 548 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 TBC1D24Q9ULP9 559 aa12.1□□□□□ -0.47
USHBP1-206ENST00000596436 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 K7EIM0 57 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 NXPH3O95157 252 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 ANXA7P20073 488 aaKnown RBP12.09□□□□□ -0.47
USHBP1-206ENST00000596436 RPEL1Q2QD12 228 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 PDCD10Q9BUL8 212 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 WDR12Q9GZL7 423 aaKnown RBP12.09□□□□□ -0.47
USHBP1-206ENST00000596436 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.09□□□□□ -0.47
USHBP1-206ENST00000596436 THYN1Q9P016 225 aa12.09□□□□□ -0.47
USHBP1-206ENST00000596436 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 C9orf170A2RU37 121 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-206ENST00000596436 ARL3P36405 182 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-206ENST00000596436 UBE2MP61081 183 aaKnown RBP12.08□□□□□ -0.48
USHBP1-206ENST00000596436 IFITM3Q01628 133 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 ZNF846Q147U1 533 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 OR52E5Q8NH55 327 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 VN1R17PQ8TDU5 208 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 MISP3Q96FF7 219 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
USHBP1-206ENST00000596436 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 I3L2K1 104 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 CYB5BO43169 146 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 OR4E1P0C645 316 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 SULT1A3P0DMM9 295 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 SULT1A4P0DMN0 295 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
USHBP1-206ENST00000596436 GPR183P32249 361 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 SPCS3P61009 180 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 ERHP84090 104 aaKnown RBP12.07□□□□□ -0.48
USHBP1-206ENST00000596436 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 OR1L6Q8NGR2 347 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 C20orf85Q9H1P6 137 aa12.07□□□□□ -0.48
USHBP1-206ENST00000596436 GGCTO75223 188 aaKnown RBP12.06□□□□□ -0.48
USHBP1-206ENST00000596436 UPK1BO75841 260 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 OR2C1O95371 312 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 TCRBP04435 133 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 CLEC3BP05452 202 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 DHRS2Q13268 280 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 SMCO1Q147U7 214 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 PVRIGQ6DKI7 326 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 ELOVL1Q9BW60 279 aa12.06□□□□□ -0.48
USHBP1-206ENST00000596436 PITX3O75364 302 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 MT-CO2P00403 227 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 EDN2P20800 178 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 SNCAP37840 140 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 ASAH1Q13510 395 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 C21orf62Q9NYP8 219 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
USHBP1-206ENST00000596436 TRAV6A0A075B6T7 132 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 A0A1B0GU03 582 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 ADAP1O75689 374 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 CSN3P07498 182 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 HOXB5P09067 269 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 TNFRSF9Q07011 255 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 HAGHQ16775 308 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 C4orf46Q504U0 113 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 ADAMTSL5Q6ZMM2 481 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms