RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TNCP24821 2201 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 TSPAN9O75954 239 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 JTBO76095 146 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 IFNA5P01569 189 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 EGR2P11161 476 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 DEFA4P12838 97 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 BLCAPP62952 87 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 TUSC1Q2TAM9 212 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 BSXQ3C1V8 233 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 UNQ5815/PRO19632Q6UWF5 114 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 HAPLN4Q86UW8 402 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 TTC9CQ8N5M4 171 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 LFNGQ8NES3 379 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 OR1L6Q8NGR2 347 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 TMEM170AQ8WVE7 144 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 ATP5SQ99766 215 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 WFDC1Q9HC57 220 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 CYTL1Q9NRR1 136 aa10.3□□□□□ -0.76
SHKBP1-209ENST00000595803 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 CORTO00230 105 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 ATP6V0E1O15342 81 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 CYB5BO43169 146 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 CRYGCP07315 174 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 CTRB1P17538 263 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 UBA52P62987 128 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 NDPQ00604 133 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 ZNF266Q14584 549 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 STPG2Q8N412 459 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 OR5T1Q8NG75 326 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 MISP3Q96FF7 219 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 GGACTQ9BVM4 153 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 PRSS22Q9GZN4 317 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 SLA2Q9H6Q3 261 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 FBXO7Q9Y3I1 522 aa10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 F11RQ9Y624 299 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-209ENST00000595803 NPIPB5A8MRT5 1133 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 IGHG2P01859 326 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 TPT1P13693 172 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 GPX4P36969 197 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 DLK1P80370 383 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 AKIRIN2Q53H80 203 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 ETFRF1Q6IPR1 90 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 DUX5Q96PT3 197 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 NPFFR1Q9GZQ6 430 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 UQCC1Q9NVA1 299 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 PRKDCP78527 4128 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-209ENST00000595803 TRAV41A0A0B4J266 112 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 RPS10-NUDT3A0A1W2PQS6 291 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 SMCO3A2RU48 225 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 TRIM77I1YAP6 450 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 FBXO24O75426 580 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 CD69Q07108 199 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 ASPHD1Q5U4P2 390 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 FAM110DQ8TAY7 271 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 CACNG8Q8WXS5 425 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 ST8SIA2Q92186 375 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 ZNF355PQ9NSJ1 428 aa10.27□□□□□ -0.77
SHKBP1-209ENST00000595803 DNAJC9-AS1A6NH13 148 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 AP4M1O00189 453 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 TCF21O43680 179 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 IGF1P05019 195 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 OPRK1P41145 380 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 MFAP2P55001 183 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 EXOSC2Q13868 293 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 MLANAQ16655 118 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 PVRIGQ6DKI7 326 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 STOML3Q8TAV4 291 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 THYN1Q9P016 225 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 LINC00527Q9UJ94 153 aa10.26□□□□□ -0.77
SHKBP1-209ENST00000595803 UBE2L5PA0A1B0GUS4 154 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 FNDC10F2Z333 226 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 G3V318 75 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 IFNA7P01567 189 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 PRH1P02810 166 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 CRYBA1P05813 215 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 CRIP2P52943 208 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 IFITM2Q01629 132 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 VWC2Q2TAL6 325 aa10.25□□□□□ -0.77
SHKBP1-209ENST00000595803 TEX261Q6UWH6 196 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms