RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 MISP3Q96FF7 219 aa16.79■□□□□ 0.28
GTF2F1-204ENST00000594965 CTSGP08311 255 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 FCGR2BP31994 310 aaPredicted RBP16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 CD81P60033 236 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 DHODHQ02127 395 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 GUCA2BQ16661 112 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 AARDQ4LEZ3 155 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 Q56UQ5 140 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 PVRIGQ6DKI7 326 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 BTNL8Q6UX41 500 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 CCDC190Q86UF4 302 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 SLC35G3Q8N808 338 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 UBAC2Q8NBM4 344 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 RBPMSQ93062 196 aaKnown RBP16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 RCHY1Q96PM5 261 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 NEURL2Q9BR09 285 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 TM2D3Q9BRN9 247 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 MCUBQ9NWR8 336 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 MRPL27Q9P0M9 148 aaKnown RBP16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 SCP2D1Q9UJQ7 156 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 UFC1Q9Y3C8 167 aa16.78■□□□□ 0.28
GTF2F1-204ENST00000594965 NDUFA4O00483 81 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 IFNA17P01571 189 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 IGHV3-48P01763 117 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 PYDC2Q56P42 97 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 FAM219AQ8IW50 185 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 MARC2Q969Z3 335 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 GPR146Q96CH1 333 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 TMEM56-RWDD3S4R434 201 aa16.77■□□□□ 0.28
GTF2F1-204ENST00000594965 RNASE2P10153 161 aaKnown RBP16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 S100A5P33763 92 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 TMEM187Q14656 261 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 TMEM268Q5VZI3 342 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 RNASE11Q8TAA1 199 aaKnown RBP16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 PINX1Q96BK5 328 aaKnown RBP16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 GALNT14Q96FL9 552 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 PDCD10Q9BUL8 212 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 WFDC10AQ9H1F0 79 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 PRR13Q9NZ81 148 aa16.76■□□□□ 0.27
GTF2F1-204ENST00000594965 IGHV3OR16-8A0A075B7F1 116 aa16.75■□□□□ 0.27
GTF2F1-204ENST00000594965 MFAP4P55083 255 aa16.75■□□□□ 0.27
GTF2F1-204ENST00000594965 LINC00322Q6ZN03 302 aaPredicted RBP16.75■□□□□ 0.27
GTF2F1-204ENST00000594965 TXN2Q99757 166 aa16.75■□□□□ 0.27
GTF2F1-204ENST00000594965 SNCAP37840 140 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 SUPT4H1P63272 117 aaKnown RBP16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 HAGHQ16775 308 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 SCGB3A2Q96PL1 93 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 TUBA4BQ9H853 241 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 ZMAT4Q9H898 229 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 DAZ1Q9NQZ3 744 aaKnown RBP16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 GAR1Q9NY12 217 aaKnown RBP16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 CACNG5Q9UF02 275 aa16.74■□□□□ 0.27
GTF2F1-204ENST00000594965 K7EMT4 169 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 SCAF4O95104 1147 aaKnown RBP16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 HOXA1P49639 335 aaPredicted RBP16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 SPCS3P61009 180 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 BSXQ3C1V8 233 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 TOMM5Q8N4H5 51 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 DEFB125Q8N687 156 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 C20orf24Q9BUV8 137 aa16.73■□□□□ 0.27
GTF2F1-204ENST00000594965 TENM3Q9P273 2699 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 TRAV25A0A0B4J276 109 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 OR11H12B2RN74 326 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 NUPL2O15504 423 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 ZNF207O43670 478 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 AKR1C4P17516 323 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 IL22RA2Q969J5 263 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 KCNIP3Q9Y2W7 256 aa16.72■□□□□ 0.27
GTF2F1-204ENST00000594965 RBMY1BA6NDE4 496 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 RBMY1EA6NEQ0 496 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 RBMY1DP0C7P1 496 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 FAUP35544 74 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 SRRQ9GZT4 340 aa16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 FNDC4Q9H6D8 234 aaPredicted RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 ENY2Q9NPA8 101 aa16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 MRPL36Q9P0J6 103 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-204ENST00000594965 C15orf62A8K5M9 175 aa16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 GNG7O60262 68 aa16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 SUB1P53999 127 aaKnown RBP eCLIP16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 AP3S2P59780 193 aa16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 RELQ04864 619 aaPredicted RBP16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 OR10C1Q96KK4 312 aa16.7■□□□□ 0.26
GTF2F1-204ENST00000594965 MLANAQ16655 118 aa16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 RBPMS2Q6ZRY4 209 aaKnown RBP16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 OR52B4Q8NGK2 314 aa16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 SRD5A3Q9H8P0 318 aa16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 SMPXQ9UHP9 88 aa16.69■□□□□ 0.26
GTF2F1-204ENST00000594965 STAB2Q8WWQ8 2551 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 CORTO00230 105 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 TMEM50AO95807 157 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 SLC16A13Q7RTY0 426 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 LYZL2Q7Z4W2 148 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 SPATA25Q9BR10 227 aa16.68■□□□□ 0.26
GTF2F1-204ENST00000594965 A0A0B4J2A0 478 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 IGHV7-4-1A0A0J9YVY3 117 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 TSPAN4O14817 238 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms