RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 DEDDO75618 318 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 IGHV3-48P01763 117 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 RPS19P39019 145 aaKnown RBP16.64■□□□□ 0.25
SSBP4-203ENST00000593641 ERHP84090 104 aaKnown RBP16.64■□□□□ 0.25
SSBP4-203ENST00000593641 RBMS2Q15434 407 aaKnown RBP16.64■□□□□ 0.25
SSBP4-203ENST00000593641 FAM90A2PQ658T7 463 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 TCF24Q7RTU0 167 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 LYSMD2Q8IV50 215 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 OR11H2Q8NH07 326 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 C11orf45Q8TAV5 145 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 C11orf68Q9H3H3 251 aaKnown RBP16.64■□□□□ 0.25
SSBP4-203ENST00000593641 FBXL17Q9UF56 701 aa16.64■□□□□ 0.25
SSBP4-203ENST00000593641 IFNA4P05014 189 aa16.63■□□□□ 0.25
SSBP4-203ENST00000593641 MRGPRFQ96AM1 343 aa16.63■□□□□ 0.25
SSBP4-203ENST00000593641 ST8SIA3O43173 380 aa16.62■□□□□ 0.25
SSBP4-203ENST00000593641 CA1P00915 261 aaPredicted RBP16.62■□□□□ 0.25
SSBP4-203ENST00000593641 NANOS2P60321 138 aaKnown RBP16.62■□□□□ 0.25
SSBP4-203ENST00000593641 HSPE1P61604 102 aaKnown RBP16.62■□□□□ 0.25
SSBP4-203ENST00000593641 LSM3P62310 102 aaKnown RBP16.62■□□□□ 0.25
SSBP4-203ENST00000593641 GPX8Q8TED1 209 aa16.62■□□□□ 0.25
SSBP4-203ENST00000593641 SMIM31A0A1B0GVY4 71 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 DNASE2O00115 360 aaPredicted RBP16.61■□□□□ 0.25
SSBP4-203ENST00000593641 IGKV1-39P01597 117 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 IGKV1D-39P04432 117 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 NPBWR1P48145 328 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 TOMM20LQ6UXN7 152 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 DUSP18Q8NEJ0 188 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 ST8SIA2Q92186 375 aa16.61■□□□□ 0.25
SSBP4-203ENST00000593641 UCP3P55916 312 aa16.6■□□□□ 0.25
SSBP4-203ENST00000593641 RPL11P62913 178 aaKnown RBP16.6■□□□□ 0.25
SSBP4-203ENST00000593641 MS4A6AQ9H2W1 248 aa16.6■□□□□ 0.25
SSBP4-203ENST00000593641 SCPEP1Q9HB40 452 aa16.6■□□□□ 0.25
SSBP4-203ENST00000593641 VCX3AQ9NNX9 186 aa16.6■□□□□ 0.25
SSBP4-203ENST00000593641 AGRNO00468 2067 aa16.6■□□□□ 0.25
SSBP4-203ENST00000593641 DFFBO76075 338 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 RCVRNP35243 200 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 SNCAP37840 140 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 TMEM187Q14656 261 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 ZNF600Q6ZNG1 722 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 SNX29P2Q8IUI4 249 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 TMEM231Q9H6L2 316 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 VSIRQ9H7M9 311 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 COMMD3Q9UBI1 195 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 PUS1Q9Y606 427 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSBP4-203ENST00000593641 VPS13DQ5THJ4 4388 aa16.59■□□□□ 0.25
SSBP4-203ENST00000593641 DEFB131AP59861 70 aa16.58■□□□□ 0.24
SSBP4-203ENST00000593641 SPINK9Q5DT21 86 aa16.58■□□□□ 0.24
SSBP4-203ENST00000593641 LEMD1Q68G75 181 aa16.58■□□□□ 0.24
SSBP4-203ENST00000593641 SLC35G3Q8N808 338 aa16.58■□□□□ 0.24
SSBP4-203ENST00000593641 TRAV2A0A0B4J234 112 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 IGHV3-66A0A0C4DH42 116 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 APOA1P02647 267 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 APOHP02749 345 aaPredicted RBP16.57■□□□□ 0.24
SSBP4-203ENST00000593641 STHQ8IWL8 128 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 C2CD4CQ8TF44 421 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 YIPF6Q96EC8 236 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 PDCD10Q9BUL8 212 aa16.57■□□□□ 0.24
SSBP4-203ENST00000593641 CORTO00230 105 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 DEFB4AO15263 64 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 AKR1C2P52895 323 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 TCTAP57738 103 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 ZFAND3Q9H8U3 227 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 RABAC1Q9UI14 185 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 DNAH6Q9C0G6 4158 aa16.56■□□□□ 0.24
SSBP4-203ENST00000593641 SCGB2A1O75556 95 aa16.55■□□□□ 0.24
SSBP4-203ENST00000593641 IFNA17P01571 189 aa16.55■□□□□ 0.24
SSBP4-203ENST00000593641 PGAM2P15259 253 aa16.55■□□□□ 0.24
SSBP4-203ENST00000593641 SUB1P53999 127 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■□□□□ 8.5
SSBP4-203ENST00000593641 IZUMO4Q1ZYL8 232 aa16.55■□□□□ 0.24
SSBP4-203ENST00000593641 LILRB2Q8N423 598 aa16.55■□□□□ 0.24
SSBP4-203ENST00000593641 A0A1W2PS18 150 aa16.54■□□□□ 0.24
SSBP4-203ENST00000593641 ATG12O94817 140 aa16.54■□□□□ 0.24
SSBP4-203ENST00000593641 RND3P61587 244 aa16.54■□□□□ 0.24
SSBP4-203ENST00000593641 ZNF486Q96H40 463 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-203ENST00000593641 HERC2O95714 4834 aa16.54■□□□□ 0.24
SSBP4-203ENST00000593641 INS-IGF2F8WCM5 200 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 M0QYG6 137 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 TMEM50AO95807 157 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 NPPCP23582 126 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 HOXA1P49639 335 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-203ENST00000593641 FAM24BQ8N5W8 94 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 METTL26Q96S19 204 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 ENY2Q9NPA8 101 aa16.53■□□□□ 0.24
SSBP4-203ENST00000593641 A0A087WXM4 84 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 A0A1B0GU03 582 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 IGKV1-5P01602 117 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 PIGPP57054 158 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 TMEM41BQ5BJD5 291 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 STXBP6Q8NFX7 210 aa16.52■□□□□ 0.24
SSBP4-203ENST00000593641 NARS2Q96I59 477 aaKnown RBP16.52■□□□□ 0.24
SSBP4-203ENST00000593641 HECTD4Q9Y4D8 3996 aa16.52■□□□□ 0.23
SSBP4-203ENST00000593641 A0A0B4J293 547 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 C11orf94C9JXX5 98 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 PI3P19957 117 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 OPRK1P41145 380 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 RNASE10Q5GAN6 216 aaKnown RBP16.51■□□□□ 0.23
SSBP4-203ENST00000593641 TP53RKQ96S44 253 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 HRH4Q9H3N8 390 aa16.51■□□□□ 0.23
SSBP4-203ENST00000593641 IGLL5B9A064 214 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 CLN5O75503 358 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms